CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAACTCTCACAACAAAAATAACAAGAGGCAACAATTACTTTCCCTT
AATATATCTTAATATCAATGAACTCAATTCCTCAATAAAAAGACATAGAC
CAACAGACTTGTTACTTACACAAGACTCAGCTGCATACAGGAAACCCACC
TCAGGAACAAGACAGACACTACCTCAGAGTAAATGGCTGGAAAACAATTT
TTGAAGCAAATGGTCCCAAGAAACAAGCTGGAGTAGCCATTCTAATATCA
AATAAAATCAACTTTCAACCTAAAGGTATCAAAAAAGATAAGGAAGGACA
CTTCATACCAAGATGAATTCTCAATTCTGAACATCTATGCTCCAAATGCA
AGGGCAGCCACATTCCTAAAGAAACGTTATTAAAGCTCAAAACACACATT
GCACCACACACAATAATAGTGGGAGACTTCAATACCCCACTCTCATCAGG
GGAGAGATCATGGAAACAGAAACGACACAAAGACACAGTGAAACTAGCAG
AAGTTATGAAACAAACNGATTTAATAGATACCTATAAAACATTTTATCCT
TAAACAAAAAGGATATAACTTCTCCACAACTCATGGCACCATCTCTAAAA
ATGGACCCTATAATCATCTTAAAACTAACCTTCCCCGAAACCAAAAGATT
GAATTAAACCCCTTTTTCTTAACAAATACCCACCGA

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTCCCTAAGAAATCGCCTCCA
CTAGTTTGTTTTCTTTTCCTTGTGGGGATATCTAAAATTTTGTTCATGTA
AAGTATTAATCCTTACTGGACTAGAGTATTTATTTGTGTTTTGACCATAA
GATATGCTAACACAGTGGAAGACTACATAGATTTCCTATCATCGAAGAGT
CCATTTCTCTGCTGTGAATGAACAGCCAAACCCTGCTTTGTCATTAAGGA
TTAAGTTCACTACCCAGCCACGTAATAGCATTACTTTTCCTATTTGCTCA
ATATTTTGAAATATCTGAGTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTT
TTGAGAAAGGCTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTG
TAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCTGA
GTGCTGGGATTAAAGGCATGTGCCACCACGCCCAGCTATCTGAGTATTTT
TTTTATCCAACTCAAAAGAATATTTTGTCTCCTGGTGCTTAAAGCACAAT
ATTGTGGTGACAGGATAGTTTTATTCCTTATAAATGATTGAAAGATGTTA
TTTGCCATGCCCTTTTAATTTCTATCCTTGATCCCTTGGATCCTGAATCC
TACTTATTGATAAAGCCCCTTGAAAAGTAACTG

Query= MSMg01no455_l15.g1 MSMg01no455_l15.g1 CHROMAT_FILE:
MSMg01no455_l15.g1 PHD_FILE: MSMg01no455_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:19 2005
         (504 letters)



>mm_chr3_124435650_124436553
          Length = 904

 Score =  878 bits (454), Expect = 0.0
 Identities = 490/504 (97%), Gaps = 4/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgtccctaagaaatcgcctccactagtttgttttcttttccttgtggggatatctaaa 60
           ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttcctaagaaatcacctccactagtttgttttcttttccttgtggggatatctaaa 260

                                                                       
Query: 61  attttgttcatgtaaagtattaatccttactggactagagtatttatttgtgttttgacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttgttcatgtaaagtattaatccttactggactagagtatttatttgtgttttgacc 320

                                                                       
Query: 121 ataagatatgctaacacagtggaagactacatagatttcctatcatcgaagagtccattt 180
           ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 321 ataagatatgctaacacagtggaagactacatagatttcctattatcgaagtgtccattt 380

                                                                       
Query: 181 ctctgctgtgaatgaacagccaaaccctgctttgtcattaaggattaagttcactaccca 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgctgtgaacgaacagccaaaccctgctttgtcattaaggattaagttcactaccca 440

                                                                       
Query: 241 gccacgtaatagcattacttttcctatttgctcaatattttgaaatatctgagtgtttgt 300
           | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 gacacgtaatagcattacttttcctatttgcacaatattttgaaatatctgagtgtttgt 500

                                                                       
Query: 301 ttgtttgtttgtttgtttgtttttttgagaaaggctttctctgtatagccctggctgtcc 360
           ||||||||||||||||||||||    |||||||| ||||||||||||||||||| |||||
Sbjct: 501 ttgtttgtttgtttgtttgttt----gagaaaggatttctctgtatagccctggttgtcc 556

                                                                       
Query: 361 tggaactcactttgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctc 420
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 557 tggaactcactttgtagaccaggctggcctcgaactcagaaatccacctgtctctgcctc 616

                                                                       
Query: 421 ctgagtgctgggattaaaggcatgtgccaccacgcccagctatctgagtattttttttat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctgagtgctgggattaaaggcatgtgccaccacgcccagctatctgagtattttttttat 676

                                   
Query: 481 ccaactcaaaagaatattttgtct 504
           ||||||||||||||||||||||||
Sbjct: 677 ccaactcaaaagaatattttgtct 700


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space:   441636
Effective search space used:   441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)