Query= MSMg01no457_j22.b1 MSMg01no457_j22.b1 CHROMAT_FILE:
MSMg01no457_j22.b1 PHD_FILE: MSMg01no457_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:53 2005
(410 letters)
>mm_chr3_123371543_123372352
Length = 810
Score = 746 bits (386), Expect = 0.0
Identities = 401/406 (98%)
Strand = Plus / Plus
Query: 5 gaattcattgaggtttcagaacttactctaaatgtgaatggcaccatttcacaaactgtg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattgaggtggaagaacttactctaaatgtgaatggcaccatttcacaaactgtg 264
Query: 65 tccaagactaaataataaggatgatgccatctgatcaccagcccttgtgttcctccactt 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 tccaagactaaataataaggatgatgccatctgatcaccagaccttgtgttcctccactt 324
Query: 125 cctgattgtggatagactgggcccttattcctgatgccacaccaccccatgatgcacttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctgattgtggatagactgggcccttattcctgatgccacaccaccccatgatgcacttg 384
Query: 185 gctccacactgtgaggcagaataattttttcttttctttcttaaaagcgcttttgttgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctccacactgtgaggcagaataattttttcttttctttcttaaaagcgcttttgttgga 444
Query: 245 cactttgccacagctacaagaacagttgctgatacacgaacaaatgagtgaatgtttatt 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactttgccacagccacaagaacagttgctgatacacgaacaaatgagtgaatgtttatt 504
Query: 305 cactttgagtaattatctgcaatgagttagtgttttgaaacatatgcagtttagaagcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cactttgagtaattatctgcaatgagttagtgttttgaaacatatgcagtttagaagcag 564
Query: 365 tttcaaactcaatagtctaaaacatatttttagaaacatttaggtc 410
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttcaaactcaatagtctaaaacatatttttagaaacatttaggtc 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_j22.g1 MSMg01no457_j22.g1 CHROMAT_FILE:
MSMg01no457_j22.g1 PHD_FILE: MSMg01no457_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:54 2005
(364 letters)
>mm_chr3_123547602_123548365
Length = 764
Score = 555 bits (287), Expect = e-162
Identities = 341/369 (92%), Gaps = 17/369 (4%)
Strand = Plus / Minus
Query: 1 aatagaacatatgtacgtgtattgctggcaaaataa-----gtaacattttcttaggaat 55
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 707 aatagaacgtatgtacgtgtattgctggcaaaataagctttgtaacattttcttaggaat 648
Query: 56 cagaacaaccacttaacaaatatgtcacatgtttgtgtgattcacacttcagcaaaagta 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 cagaacaaccacttaacaaatatgtcacatgtttgtgtgattcacacttcagcaaaagta 588
Query: 116 ccccctgacaaattccccaagaggtaatgattggtgtgatgttacttcagtgatgaagaa 175
||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 587 ccccctgacaaattccccaagag------------gtgacgttacttcagtgatgaagaa 540
Query: 176 ggggtgagcgtccggcttcaaggtcctccaagtcagggagcagggagcagggatactgtt 235
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 539 ggggtgagcgtccagcttcaaggtcctccaagtcagggagcagggagtggggatactgtt 480
Query: 236 ttactctgaagcaatcttcttcacatatggattacagagccctacaactacattcagctt 295
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 479 ttactctgaagcaatcttcttcatatatggattacagagccctacaaatacattcagctt 420
Query: 296 ctaaaggaattctgagtctaaatgcactaagagacagatactataagaaaagcctcgctt 355
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 419 ctaaagaaattctgagtctaaatgcactaagagacagatactagaagaaaagcctcattt 360
Query: 356 gctattcca 364
|||||||||
Sbjct: 359 gctattcca 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
