Query= MSMg01no457_o23.b1 MSMg01no457_o23.b1 CHROMAT_FILE:
MSMg01no457_o23.b1 PHD_FILE: MSMg01no457_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:21 2005
(404 letters)
>mm_chr3_8515145_8515948
Length = 804
Score = 745 bits (385), Expect = 0.0
Identities = 400/405 (98%), Gaps = 3/405 (0%)
Strand = Plus / Minus
Query: 1 aatgcttaatattttttcatgcaacatctaggattaaatgctctgttggaataatttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgcttaatattttttcatgcaacatctaggattaaatgctctgttggaataatttggt 382
Query: 61 aagtactatctatgcacatacactaacttcagtatgattttaacctgttctcctttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 aagtactatctatgcacatacactaacttcagtatgattttaacctgttttcctttcttc 322
Query: 121 cccatatggagttaagtgtctagtaacttgtgcattatcctgcatctaaaaggttctggt 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 cccatatggagttaagtgtctagtaatttgtgcattatcctgcatctaaaaggttctggt 262
Query: 181 tttaacttctgttctgtgtatcatttgtaagtgacagtaatatcatattatatattatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaacttctgttctgtgtatcatttgtaagtgacagtaatatcatattatatattatcc 202
Query: 241 cttcttttttaatttaacaatttttat-tggatattttcttcatttacatttcaaatgct 299
||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 201 cttctttttta-tttaacaattttt-tctggatattttcttcatttacatttcaaatgct 144
Query: 300 atcctgaaagtcccctatttttcttaactgagtcacagacccacccacccacacacatat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atcctgaaagtcccctatttttcttaactgagtcacagacccacccacccacacacatat 84
Query: 360 tcacagagccaggcttatttctcccaccattttcctcaaaggcct 404
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tcacagagccaggcttatttctcccaccattttcctcaaaggcct 39
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_o23.g1 MSMg01no457_o23.g1 CHROMAT_FILE:
MSMg01no457_o23.g1 PHD_FILE: MSMg01no457_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:21 2005
(345 letters)
>mm_chr3_8347665_8348410
Length = 746
Score = 584 bits (302), Expect = e-171
Identities = 335/346 (96%), Gaps = 1/346 (0%)
Strand = Plus / Plus
Query: 1 attaggtaacaattgataatacattaggacc-agaagataataatacaaaataaactaat 59
||||||||||| ||||||||| ||||||||| | || |||||||||||||||||||||||
Sbjct: 201 attaggtaacagttgataatatattaggaccaaaaaaataataatacaaaataaactaat 260
Query: 60 tataactgtatgtaccaaaaagaataattctgaaagagaaaaaataaatttaaagtaatt 119
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 aataactgtatgtaccaaaaagaataattctgaaggagaaaaaataaatttaaagtaatt 320
Query: 120 ctagaaagattacagtttcaatatataaatgtttcaaaattggacacagtgaataatata 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagaaagattacagtttcaatatataaatgtttcaaaattggacacagtgaataatata 380
Query: 180 ttaagcacaaaacatttgcattgaaatgaatgataaaataagcagaaagaacttttttgc 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ttaagcacaaaacatttgcattgaaataaatgataaaataagcagaaagaacttttttgc 440
Query: 240 atgaatctaggacagcaagtcattctctgtgggagaaaaagcccagagtgtctcctagat 299
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 atgaatctagggcagcaagtcattctctgtgggaggaaaagcccagagtgtctcctagat 500
Query: 300 atcgctaaattcagtcaagttgacactaaagattgatcatcacggt 345
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcgctaaattcagtcaagttgacactaaagattgatcatcacggt 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 746
Length adjustment: 9
Effective length of query: 336
Effective length of database: 737
Effective search space: 247632
Effective search space used: 247632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
