NGGGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGC
GCGGAATTCAAAGCAAGCTTGCGGAAATTTATGATACCCTGTCTCAAAAT
GAAAACATAAAGGGGGATAGAGGAGGCGGAGGCTGAAGAGATGGCTCCGC
AATTAAGAGCTGTTGCTGCTTCCAGAGGACTCAGATTTAGTACTTAGCAT
CCCACATAGTAACTTATAGCCTTTCTAAATTATAGTTCCATACGTTCCAG
GATCTTTTTCTGGCCTCTGTAGGCACCAGGCACATACACAACACAGTATA
CATGTGGAGAAAACACTCATACACATAAAACTCTTATAAATAAACCTTTT
TTAAAATGTTAAAGAAGTACTGGAGACATAGCTCAGTGTTAAAGGACTAA
CCTAGCATGCATGAGTCCTTAAGTTCAATCTCCAGTAGGGTGAAAAACAA
AAACAAAAATGAACAAGAAAGAAAAAGAATCCAAAAACAAAATAACAACA
GCCACGAATGCAGGCCTCTCTTTCTGTACATTTGAAAATGTACAGCTGTC
AACCTGAGCCAATCACTTCCTGTACTGTGGTAACACTTTCCACATTTAGC
CAGAAAATAAGCAGCCATTCCACATCCACAGACTTTCATTTACTCCGCAA
ATTTTGTCTTATTAAAAAAAAATTAATGGAAACCCCCAAGTAACAGAAAC
TATTCTAGATTCCTACAGATTCCCAGAGTATCATACTATCTAGTCTCTTG
AAAATATAAATG

NGGGACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTCAGCAAAATTCTTTGGGCCATTTAGTCCCA
CAAATGAGTAAAATGCACCTTTAGAATAAGAAGTCAGACAACAGAAGAGA
GCAACTCGGGAATCTATTGTTAAATGCTTTTTGGGTTATTGTGCCATTGT
GAAAACATCATCAGGAATAAAATAATTTATTTCAGACAAGGGCATAGAAT
ATCTTATGGCTACTGTTGCTTGGACCCAGTGCCATCTACATGGGACATAA
TTGCAATCAGGGGTGAAATTAGATCTTTTTTCAAAATATGGCCCTTTAAA
TAGACATATAAGTTCCCAGAGCACGAAAGATTGTCAACACAGCTCCTGCT
GCAAAGGACGTGAAAATGGCCCTAAGAACACACAGTCGAACCTTTCCTCC
ATGACTGGCTGCACAGGGCTCTGTCTATAAGGACCTTGGCCACTGTCTCC
TTAGGGAGTGAAGGCAATCCACTTCCTGGAGGGGAAAGTAAAGCTATTCG
CAGGAGAACCCAGACTTCCACATGTAAGTAATTGGAATCAAGGGAATAAC
TGTTCCCAGGGAACATGATCGTAAGTGGATAATAGGGAAGAGACAGAAGA
ATAGTTTCACCTGAATGAGTGGGGGTGGGGAGACTTGTGATGAATGAGGT
TAGAGAAAGAGAACACTCCAGTACCATATAATCCCN

Query= MSMg01no458_l05.b1 MSMg01no458_l05.b1 CHROMAT_FILE:
MSMg01no458_l05.b1 PHD_FILE: MSMg01no458_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:22 2005
         (599 letters)



>mm_chr3_81899192_81900190
          Length = 999

 Score =  735 bits (380), Expect = 0.0
 Identities = 398/404 (98%)
 Strand = Plus / Minus

                                                                       
Query: 196 caggatctttttctggcctctgtaggcaccaggcacatacacaacacagtatacatgtgg 255
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 999 caggatctttttctggcctctgtaggcaccaggcatatacacaacacagtatacatgtgg 940

                                                                       
Query: 256 agaaaacactcatacacataaaactcttataaataaaccttttttaaaatgttaaagaag 315
           | |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||
Sbjct: 939 aaaaaacactcatacacataaaacacaaataaataaaccttttttaaaatgttaaagaag 880

                                                                       
Query: 316 tactggagacatagctcagtgttaaaggactaacctagcatgcatgagtccttaagttca 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 tactggagacatagctcagtgttaaaggactaacctagcatgcatgagtccttaagttca 820

                                                                       
Query: 376 atctccagtagggtgaaaaacaaaaacaaaaatgaacaagaaagaaaaagaatccaaaaa 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 atctccagtagggtgaaaaacaaaaacaaaaatgaacaagaaagaaaaagaatccaaaaa 760

                                                                       
Query: 436 caaaataacaacagccacgaatgcaggcctctctttctgtacatttgaaaatgtacagct 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 caaaataacaacagccacgaatgcaggcctctctttctgtacatttgaaaatgtacagct 700

                                                                       
Query: 496 gtcaacctgagccaatcacttcctgtactgtggtaacactttccacatttagccagaaaa 555
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gtcaacctgagccaaccacttcctgtactgtggtaacactttccacatttagccagaaaa 640

                                                       
Query: 556 taagcagccattccacatccacagactttcatttactccgcaaa 599
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 taagcagccattccacatccacagactttcatttactccgcaaa 596


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no458_l05.g1 MSMg01no458_l05.g1 CHROMAT_FILE:
MSMg01no458_l05.g1 PHD_FILE: MSMg01no458_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:22 2005
         (645 letters)



>mm_chr3_81750872_81751916
          Length = 1045

 Score = 1185 bits (613), Expect = 0.0
 Identities = 637/645 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctttgggccatttagtcccacaaatgagtaaaatgcacctttagaataagaagtcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttgggccatttagtcccacaaatgagtaaaatgcacctttagaataagaagtcag 260

                                                                       
Query: 61  acaacagaagagagcaactcgggaatctattgttaaatgctttttgggttattgtgccat 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaacagaagagagcaactctggaatctattgttaaatgctttttgggttattgtgccat 320

                                                                       
Query: 121 tgtgaaaacatcatcaggaataaaataatttatttcagacaagggcatagaatatcttat 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgaaaacatcatcaggaataaaatcatttatttcagacaagggcatagaatatcttat 380

                                                                       
Query: 181 ggctactgttgcttggacccagtgccatctacatgggacataattgcaatcaggggtgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctactgttgcttggacccagtgccatctacatgggacataattgcaatcaggggtgaa 440

                                                                       
Query: 241 attagatcttttttcaaaatatggccctttaaatagacatataagttcccagagcacgaa 300
           |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attagatctttgaacaaaatatggccctttaaatagacatataagttcccagagcacgaa 500

                                                                       
Query: 301 agattgtcaacacagctcctgctgcaaaggacgtgaaaatggccctaagaacacacagtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattgtcaacacagctcctgctgcaaaggacgtgaaaatggccctaagaacacacagtc 560

                                                                       
Query: 361 gaacctttcctccatgactggctgcacagggctctgtctataaggaccttggccactgtc 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 gaacctttcctccatgactggctgcacagggctctgtatataaggaccttggccactgtc 620

                                                                       
Query: 421 tccttagggagtgaaggcaatccacttcctggaggggaaagtaaagctattcgcaggaga 480
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccttagggagtgaaggtaatccacttcctggaggggaaagtaaagctattcgcaggaga 680

                                                                       
Query: 481 acccagacttccacatgtaagtaattggaatcaagggaataactgttcccagggaacatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acccagacttccacatgtaagtaattggaatcaagggaataactgttcccagggaacatg 740

                                                                       
Query: 541 atcgtaagtggataatagggaagagacagaagaatagtttcacctgaatgagtgggggtg 600
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atcgtaagtggataacagggaagagacagaagaatagtttcacctgaatgagtgggggtg 800

                                                        
Query: 601 gggagacttgtgatgaatgaggttagagaaagagaacactccagt 645
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gggagacttgtgatgaatgaggttagagaaagagaacactccagt 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)