CAATXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCCAAGAGGATCCGCGGA
ATTCACAATTTCCCAGACCTCCAGCTTTCATTACTACCCTGTAAATCCCA
ACAGATGAAGCTGAAAGGCCCACAGAGAACACATCACCTGAACCTCATGA
AGAACCAGCCACAGAATCTTGTGTACATCAGAGCAAAAATACAGAGTATT
TATTCATTTCTTCCCACTAGAGGGACACACTGTTCTTGGACAGACAAATG
AATCATCAGTTGTCAGGAGTTGCCTTTGGAGAATGATCAATGAACTCCTT
TTCAGGGGTTGGAAATTGATACCAGGGTCCATCACCTCGGGCACGCATCA
GCCTTCGAACTTCCTGCTCCTTTAACCTGTAACAAAGGGAATAGTAACTG
TGAGGATACGGACACGTGAGCAGATGCAGCCACTACAGCAGTCAGCAGAG
CTTCTTCAAAATAACAAAGCAGAACCACCATAGGACAGAGGCCTTCACCA
CTCCATAGCCGCACTGCTCAGGGGTCTAAGTTGGCTCACTAGACACATAG
CTGACTATCCATGTTCCTGTGCATAATACCCAAAATATGGAAGCACCCTA
TCTGTCCATCAACAGATGAATAATAAAGAAAATGTGGCACATTTACACGA
TGGCACGCCATTCAGGCATATGTAGACTACTGCATGAAGCTGGAGGGCAT
CATGTCCTCTGCTATGGGGAAATCCTACTTTTGTG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTTTTTA
ATGGGGTTATTTGGTTTTCTGGAGTCCAACTTCTTGAGTTCTTTATAAAT
ATATTGGATATTAGCCCTCATATTGGATTTAGGATTAGTAAAGATCTTTT
CCCAATCTGTTGGTTGCTGTTTTGTCTTATTCGCACATGTGTCAATGTTT
TATTTTATTTTTNNCTTTNNNATCGGGCCCCCCGCCCCTGTCCTTCTTCC
TCTCTTCTTTTTTTCGCGTCTTTCTCGTTTTTTCTCTCCCCTTCTTTTTC
CCGTCCTTTCCCCTCCCCTTCTCCCTTTTTCCTCTGTTCTTCCCACCACA
GTTGCTTTTCCCTCCGCCTCTTTTTTTGTGTCGTCTGCGCTCGTTTTTTT
TTTCTCTTTTCTTTTTCTCTTTATGGCTGTCGCGCTCTTTTTTCTCCTCC
CTCCCCTTCTCCTCTTTCCTTACGTCCCTCGGCCTCTGCCTTTATTTTTT
TTTCTTTCCTTCTCCTCCCGACCTTACTTCTTTCTCGCTTTCCTCACCGT
ACCTTACGTTTTCCCGTCGCTGCGCTTCCTCTTTTTTTTTTTCTTCTTTT
TTTCCCCTTACCCTGTTTGTCTTTTATTCCGCGCCGCCATTTTCCACTCT
CTCCGCCTACACTTAAACACCAAATATTTTCACTCTTCCCTTTTTTGTGC
CGTGAGCGGCGGGCTGTGTTTTTTCCCTCACTTTTTCCCGTCTATTCTTT
C

Query= MSMg01no459_d01.b1 MSMg01no459_d01.b1 CHROMAT_FILE:
MSMg01no459_d01.b1 PHD_FILE: MSMg01no459_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:01 2005
         (626 letters)



>mm_chr3_32649693_32650718
          Length = 1026

 Score = 1073 bits (555), Expect = 0.0
 Identities = 579/587 (98%)
 Strand = Plus / Minus

                                                                       
Query: 11  ggaattcacaatttcccagacctccagctttcattactaccctgtaaatcccaacagatg 70
           ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 587 ggaattcacaacttcccagacctccaggtttcattactaccctgtaaatcccaacagatg 528

                                                                       
Query: 71  aagctgaaaggcccacagagaacacatcacctgaacctcatgaagaaccagccacagaat 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aagctgaaaggcccacagagaacacatcacctgaacctcatgaagaaccagccacagaat 468

                                                                       
Query: 131 cttgtgtacatcagagcaaaaatacagagtatttattcatttcttcccactagagggaca 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cttgtgtacatcagagcaaaaatacagagtatttattcatttcttcccactagagggaca 408

                                                                       
Query: 191 cactgttcttggacagacaaatgaatcatcagttgtcaggagttgcctttggagaatgat 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cactgttcttggacagacaaatgaatcatcagttgtcaggagttgcctttggagaatgat 348

                                                                       
Query: 251 caatgaactccttttcaggggttggaaattgataccagggtccatcacctcgggcacgca 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caatgaactccttttcaggggttggaaattgataccagggtccatcacctcgggcacgca 288

                                                                       
Query: 311 tcagccttcgaacttcctgctcctttaacctgtaacaaagggaatagtaactgtgaggat 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tcagccttcgaacttcctgctcctttaacctgtaacaaagggaatagtaactgtgaggat 228

                                                                       
Query: 371 acggacacgtgagcagatgcagccactacagcagtcagcagagcttcttcaaaataacaa 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 acggacacgtgagcagatgcagccactacagcagtcagcagagcttcttcaaaataacaa 168

                                                                       
Query: 431 agcagaaccaccataggacagaggccttcaccactccatagccgcactgctcaggggtct 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 agcagaaccaccataggacagaggccttcaccactccatagccgcactgctcaggggtct 108

                                                                       
Query: 491 aagttggctcactagacacatagctgactatccatgttcctgtgcataatacccaaaata 550
           ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| |||
Sbjct: 107 aagttggctcattagacacatagctgagtatccatgttcttgtgcataatacccaagata 48

                                                          
Query: 551 tggaagcaccctatctgtccatcaacagatgaataataaagaaaatg 597
           ||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 47  tggaagcactctagctgtccatcaacagatgaataataaagaaaatg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)