Query= MSMg01no460_a13.b1 MSMg01no460_a13.b1 CHROMAT_FILE:
MSMg01no460_a13.b1 PHD_FILE: MSMg01no460_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:10 2005
(654 letters)
>mm_chr3_132378411_132379463
Length = 1053
Score = 1241 bits (642), Expect = 0.0
Identities = 651/654 (99%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 1 catgtgccaagtgaaaaaccattgccttctggccccaaatcagatgtatggtctcttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtgccaagtgaaaaaccattgccttctggccccaaatcagatgtatggtctcttggg 260
Query: 61 ataattttatttgagctttgtgtggtatgtataaagaaatattaaactaataaaataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataattttatttgagctttgtgtggtatgtataaagaaatattaaactaataaaataatt 320
Query: 121 tgtgtgatcattagcatttgctttttagagaggaagtttacacagtaataaaatattttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgatcattagcatttgctttttagagaggaagtttacacagtaataaaatattttg 380
Query: 181 ttgtacaaattgactagatataaatagactattttatcagagctcatagttatatttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtacaaattgactagatataaatagactattttatcagagctcatagttatatttcag 440
Query: 241 tctattatcgtttgaagggtacagtgttgaacgaattcaataaaaggaaagtttcgtttt 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctataa-cgtttgaagggtacagtgttgaacgaattcaataaaaggaaagtttcgtttt 499
Query: 301 tctatgagttttatgtcacttggttatgtccttagtttgggcatccagtgcaagtatgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctatgagttttatgtcacttggttatgtccttagtttgggcatccagtgcaagtatgac 559
Query: 361 aggctacatttaagtctaaatagtctgtataaatcaacacttagaattttatagacaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggctacatttaagtctaaatagtctgtataaatcaacacttagaattttatagacaata 619
Query: 421 ttaagatacaagtgaatatcataccagcaactagcaaatggaactttttgtgtagtagga 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttaagatacaagtgaatgtcataccagcaactagcaaatggaactttttgtgtagtagga 679
Query: 481 atatttttttaaaatgagtggaaagctgtatcaaaatcatactggaaggaagtgtttact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atatttttttaaaatgagtggaaagctgtatcaaaatcatactggaaggaagtgtttact 739
Query: 541 ctgtcactaagaatgtggcagagccatgctgccatgagacgttcccactgctgcagtgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctgtcactaagaatgtggcagagccatgctgccatgagacgttcccactgctgcagtgtg 799
Query: 601 tgggagagggctgtggtactgatgagaaaatgagaaaaaaacataagcagtaat 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgggagagggctgtggtactgatgagaaaatgagaaaaaaacataagcagtaat 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1053
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1043
Effective search space: 671692
Effective search space used: 671692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_a13.g1 MSMg01no460_a13.g1 CHROMAT_FILE:
MSMg01no460_a13.g1 PHD_FILE: MSMg01no460_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:10 2005
(555 letters)
>mm_chr3_132526199_132527153
Length = 955
Score = 818 bits (423), Expect = 0.0
Identities = 450/459 (98%)
Strand = Plus / Minus
Query: 97 cacaatcttccatggctggcaacaaaagcatcatggggaatccacccacgattaatgagc 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 cacaatcttccatggctggcaacaaaagcatcatggggaatccacccacgattaatgagc 896
Query: 157 ttgcacttgtgccagacatggcgactccgtgcgtgttactttgtcctcacacaaccccag 216
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 895 ttgcacttgtgccagacatggcgactccgtgcgtgttacttcgtcctcacacaaccccag 836
Query: 217 tcagataccattttcccacttgattgcaaaaggaggctcagaggccagggaaggttgaga 276
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tcagataccattgtcccacttgattgcaaaaggaggctcagaggccagggaaggttgaga 776
Query: 277 aacctgcgtaggttacaaaggcgctgaggagctgttcctgtttgtgtaaaggcagacctt 336
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aacctgcgtaggttacacaggcgctgaggagctgttcctgtttgtgtaaaggcagacctt 716
Query: 337 ctggctgcagggctgctcctcgcacgtttccactggaatatcaggtagcacgtgggattg 396
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 715 ctggctgcagggctgctcctcgcacgtttccactggaatatcagggcgcacgtgggattg 656
Query: 397 cttgggtgatacatctgtctgggagttattaacaggatctgaggatagttctagtcgtga 456
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cttggatgatacatctgtctgggagttattaacaggatctgaggatagttctagtcgtga 596
Query: 457 ttctgaaaaggaaagacctgtttttcctggtctctttacagaaggcaaactgtgaggagt 516
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttctgaaaaggaaagacctgtttctcctggtctctttacagaaggcaaactgtgaggagt 536
Query: 517 gtgtgcctgcaaagcagagagaaagagatgagggagaaa 555
| |||||||||||||||||||||||||||||| ||||||
Sbjct: 535 gggtgcctgcaaagcagagagaaagagatgagcgagaaa 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
