XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CATATATAGCTGACTGGCATGTAAATTGGTAGAATCATTTTTGAAATATA
TCTCAAGTTGAGCATATGCATGCTGTATACTTAATAATTCCCCTCCTAAT
TGCATGCTTGAGAAAGCATATATATGTGAATAAAAAGATATGCAAAAAAA
AAAACAAATTCCAGGGAGCAACTGTTACATTCTAGGAGTTTAAAGCTAGA
AATGACCCAAGTGTGCAGCAATAAGAGAAGTTGTGGAATATCTGTAGCCA
AAAAGGACTGAATAAGCTCTGTGTATTTGTAAAGCATAAGTGTACATCCT
AAAACGGTATTTCTTGAAAGCCAGACCAAAGTAGACCATAGATGTTACAG
TTCCATTTCTTTATCTGGGAGAGGGCGTGGTTCTGGTTTCTGGTACATTG
GTAGTGTTACAGGTCTTTGTTTTGGATAGTGTTACAGGTTTTTGTTTTGT
TTGTTGGGTTAATATTTTTTTCAGATAAGTTTAATTTGTGGTATTTTACT
GAGGTCTCTTCCAAGTATTTGAGTCCTTTTCTGTGTACATGTAATATTTT
GAAAACCTAAAACCTCTATTGGCAAACTGTGCTTCATGTACTAAAAGAAA
GTCATTTGTTACTACTATTAGAAATTGTAATTGTCAAGCTAAAAAAGATG
GTTAGCGCTAAATAAACCTGGGAATA

AAAACAANGNNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTATACAGTTCATTCTCTAATTTA
TACTGCATTCTCAATACATCTCTTTCAAATAAGTAAATACTAACTTTACT
AATTTTAATATCCATTTTAAAAACCAACTTCTCTCTTTGCCTAATANANC
TAACTTATTCCCATTTTGCCCCTTAAAAACTAGAAAAACCCTCCCCCCAT
GGCCCTTTAAACCCAAAAAAAAAAAAAGGGGGAAAATTTAAAGGTATTTT
AAAAAAAAAAACATTTTTCCTTTTTTCGGAAAAATATTTTTTTTCGGGTT
TATTTTATAAAACTCTTTAAAAAAAAAGNNNNNNCAAAAAAAATAACNNN
NNNNNNNNAAAAAAAAAAAATTTCTTTTTTTTTTTTCTGNNNNTNGTTTC
TATTTAAACCACATTCTAAAAAAAANNNNTNTTTTTTATATTTTTTTTTC
TATTATTATAGAAGAAAAGAAAGTCTGGGGGGGGGGGGGGGATTTATACT
AAACAAAAACAAAAAAAAAAAAAAAANNNNAANNCCCTTTTNNNNNNNNN
NNNNNNNNANTAANAANTATTTTTTTATTTCTTCTTTAACCCACCCTCAC
AATNAANTCTTATGNNTTGCCCTCACTCCACACATTAAAAAATATAANTN
NNNNNNNTNNNNCNNCGGCATTCTTGAAAAAAATAACTAAAAAAAAAGAA
AAANNCTCCTCTTNNNNNNNNNNNNNANATCAAATATACACCAAAATNTA
CTAACNTTNNTNNNTTTATTTTTTTTG

Query= MSMg01no460_a21.b1 MSMg01no460_a21.b1 CHROMAT_FILE:
MSMg01no460_a21.b1 PHD_FILE: MSMg01no460_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:12 2005
         (606 letters)



>mm_chr3_119451588_119452593
          Length = 1006

 Score = 1071 bits (554), Expect = 0.0
 Identities = 564/568 (99%), Gaps = 2/568 (0%)
 Strand = Plus / Minus

                                                                        
Query: 39   ggtagaatcatttttgaaatatatctcaagttgagcatatgcatgctgtatacttaataa 98
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 ggtagaatcatttttgaaatatatctcaagttgagcatatgcatgctgtatacttaataa 947

                                                                        
Query: 99   ttcccctcctaattgcatgcttgagaaagcatatatatgtgaataaaaagatatgcaaaa 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 946  ttcccctcctaattgcatgcttgagaaagcatatatatgtgaataaaaagatatgc--aa 889

                                                                        
Query: 159  aaaaaaacaaattccagggagcaactgttacattctaggagtttaaagctagaaatgacc 218
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  aaaaaaccaaattccagggagcaactgttacattctaggagtttaaagctagaaatgacc 829

                                                                        
Query: 219  caagtgtgcagcaataagagaagttgtggaatatctgtagccaaaaaggactgaataagc 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 828  caagtgtgcagcaataagagaagttgtggaatatctgtagccaaaaaggactgaacaagc 769

                                                                        
Query: 279  tctgtgtatttgtaaagcataagtgtacatcctaaaacggtatttcttgaaagccagacc 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768  tctgtgtatttgtaaagcataagtgtacatcctaaaacggtatttcttgaaagccagacc 709

                                                                        
Query: 339  aaagtagaccatagatgttacagttccatttctttatctgggagagggcgtggttctggt 398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708  aaagtagaccatagatgttacagttccatttctttatctgggagagggcgtggttctggt 649

                                                                        
Query: 399  ttctggtacattggtagtgttacaggtctttgttttggatagtgttacaggtttttgttt 458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648  ttctggtacattggtagtgttacaggtctttgttttggatagtgttacaggtttttgttt 589

                                                                        
Query: 459  tgtttgttgggttaatatttttttcagataagtttaatttgtggtattttactgaggtct 518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588  tgtttgttgggttaatatttttttcagataagtttaatttgtggtattttactgaggtct 529

                                                                        
Query: 519  cttccaagtatttgagtccttttctgtgtacatgtaatattttgaaaacctaaaacctct 578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528  cttccaagtatttgagtccttttctgtgtacatgtaatattttgaaaacctaaaacctct 469

                                        
Query: 579  attggcaaactgtgcttcatgtactaaa 606
            ||||||||||||||||||||||||||||
Sbjct: 468  attggcaaactgtgcttcatgtactaaa 441


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space:   593616
Effective search space used:   593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)