XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCT
GATCTTCTCAAGACTTTTATCATGAATGGGTGTTCGATTTTTTTCAAATG
ATTTCTCCACATTTTATGAGATGATCATGTAGTTTTTGTCTTTGAGTTTG
TTTATATACTGGATTATGTTGATGGATTTCCATATATTAAACCATCCCTG
CATCCCTGGAATGAAACCTACTTGGTGAGGATGGATGATTGTTTTGATGT
GTTCTGGAATTCGGTTAGCAAGAATTTTATTGAGGATTTTTGCATTGATA
TTCTTATTGGAAATTGGTCAGAAGTTCTCTATATTGTTGGAAATTTCTGT
GGTTTAGGAATCAGAGTAATTGTGGCTTCATAAAAAGAATTGTGTAGAGT
ACCTTCTGCTTCTATTTCATGGAATAGTTTGTGCAGAACTGGAATTAGAT
CTTCTATGAAGGTCTGATAGAACTCTGCACTAAACCGATTTGGTCCTGGG
CTTTTTTTTTTTTTTCTTTTTTTCNTGGGTGGGAGACTATTAATGACTGC
TTCTATTTCTTTAGGTGATATAGGACCGTTTAAATCATTAACCTGATCCT
GATTTTACTTTGGTACATGGATTTGTCTATATATTTGTCCTTTTTGCTTT
TTTGGTTATAGTCTTTTGAACAAAAATCTCACAGCGTCTCTGTTTTCTCC
CTTTTATCTCCCGCCATTTTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTAGGAATGTGGTATCCTAGCTGTGTTCTTCTGT
ATTTATTTCTTCTAGACATTCAATAAAAAAACAAGACTCTGGAAATTGTC
TCCTTGGACTGTGGGCTTCCTGAATTATTTACATGAAGAGCAGCAGGTGC
CCAACTCTTGTGTGTTCAGACTTGTATTCATAAATGTTTTGGGGAAAGCC
TTTCATTATACCCTAATAATTTAAAAATTTGTGTTATAAGAGTTATTTAA
TATTTTTTATGCCAGTTGATTTTCTTACATTTTTTTCACTTAAATAGTAA
TGTGCTTACAATCCTGGTTGTTATACACATTATTGAATGTCTTTCTAATG
AGAGCTAAATCTTTTATTCTGACAGACCTTTAACATAAATATTCTGTGTT
ATGTTAGCATTAAAACACTCCAGGACAACCTATGGTGGGTGAGTTCTTTT
GAACTCACTTAGTCATCTCTTAATTTACGTGCTGGTCAATGATTTTTGCA
TTGTTATTAACTTCAGACAAAAATACTTATAAGTGGATATTAGCCCAGAA
ACTTTAGAATACCCAAAAAACAATTTGCAAAACACATGAAACTCAAGAAA
AATGAAGACCAAAGTGTGGACACTTTGTCCCTTCTTAGAATTGGGAAAAA
ACACCCATGGAAGGAGTTACG

Query= MSMg01no460_b15.g1 MSMg01no460_b15.g1 CHROMAT_FILE:
MSMg01no460_b15.g1 PHD_FILE: MSMg01no460_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:15 2005
         (594 letters)



>mm_chr3_47560841_47561834
          Length = 994

 Score = 1149 bits (594), Expect = 0.0
 Identities = 594/594 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   taggaatgtggtatcctagctgtgttcttctgtatttatttcttctagacattcaataaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 taggaatgtggtatcctagctgtgttcttctgtatttatttcttctagacattcaataaa 648

                                                                       
Query: 61  aaaacaagactctggaaattgtctccttggactgtgggcttcctgaattatttacatgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aaaacaagactctggaaattgtctccttggactgtgggcttcctgaattatttacatgaa 588

                                                                       
Query: 121 gagcagcaggtgcccaactcttgtgtgttcagacttgtattcataaatgttttggggaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gagcagcaggtgcccaactcttgtgtgttcagacttgtattcataaatgttttggggaaa 528

                                                                       
Query: 181 gcctttcattataccctaataatttaaaaatttgtgttataagagttatttaatattttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gcctttcattataccctaataatttaaaaatttgtgttataagagttatttaatattttt 468

                                                                       
Query: 241 tatgccagttgattttcttacatttttttcacttaaatagtaatgtgcttacaatcctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tatgccagttgattttcttacatttttttcacttaaatagtaatgtgcttacaatcctgg 408

                                                                       
Query: 301 ttgttatacacattattgaatgtctttctaatgagagctaaatcttttattctgacagac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttgttatacacattattgaatgtctttctaatgagagctaaatcttttattctgacagac 348

                                                                       
Query: 361 ctttaacataaatattctgtgttatgttagcattaaaacactccaggacaacctatggtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ctttaacataaatattctgtgttatgttagcattaaaacactccaggacaacctatggtg 288

                                                                       
Query: 421 ggtgagttcttttgaactcacttagtcatctcttaatttacgtgctggtcaatgattttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggtgagttcttttgaactcacttagtcatctcttaatttacgtgctggtcaatgattttt 228

                                                                       
Query: 481 gcattgttattaacttcagacaaaaatacttataagtggatattagcccagaaactttag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gcattgttattaacttcagacaaaaatacttataagtggatattagcccagaaactttag 168

                                                                 
Query: 541 aatacccaaaaaacaatttgcaaaacacatgaaactcaagaaaaatgaagacca 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aatacccaaaaaacaatttgcaaaacacatgaaactcaagaaaaatgaagacca 114


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)