XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTA
TTTCCCCGATGCCAACACTTTTATTTATTTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATTATTATTTTAGAACGGCCGCCGGCCT
ACTGGCGGGGGGGGCCCCCGCGGCATCCGTCGGCGGCGCGCGGGGGCCGG
GCGCCCGGTGCCCGGGTGTGTCACGCCGCGCTCTCAAGCGGCCTCGGCGG
CACCACTCCAAGAGCGGCGCCGGCGGCCGGAGGGCTGAGGCGCTCGGGGG
GGCGTTCTATGAGGCCGTCGCTCGCCCCGGGGGCTGCTGGGGGGCGGCGG
CGCTGCCTCCCCGCGCCGCTGCGCGCCCCCGGGCCGCGCGCGCCGCGCAC
CGCCGCCCCCCTCTCCTCCGGCGCCCGGCCCGCGGGCCCCCCGCGCCCCG
GCGGCGGGGAAGGCCCCGGGGCCAGCCCCGCCGCCCCCCCCCCCCGCGCC
CCCCCCCGCCCGGCCTGCGCGCCCGCCCCCTGTCCCCGGGGCCGCCCCCC
CCCCCCCCGGGGGGGCCCGCCCGTCCTGGGGGCGCCCCGGCCCCCCGGGC
GCGCCCCCCCCCCCCCCCCCGCCCCCGTCGCCCCCGCCCCGCGGGGCCCG
CGCCGCTCGGCCCCCCCCCCCGGGCCGCGGGGCCCCGCCCCGTGTCCCCC
GCCCCCCCCCGTTCCCCCCGCGCTCCCCCCCCGCCTTCCN

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTCCTTAGCTCTGCATAACACTGGCCTGGTGA
TGCACACCTATAATTACTTCTGAAAATAGAGGTAGAAGGAACAGGGATTC
AAAAGTCATCTTATTCTACAAAGGGAATTTGATGTCAGCCGTGGATGATG
ATGAACAGGACATGATGAACGAACAATATGCCTGAAAATTCCATGACCTG
AATTTGATTCCCAGAACCCATTCAGTGGGGGCTGAAGAGGTACTTGGTCT
TCTGAGGATCTGAGTTCAACTTCTGTGCCTACAAGGTGACTCCTGATAAT
CCATAACCTCTTCAGGCACCAGGCTTGCATGTGGTGCACATACACTCTCT
GGGAAAACCACTTATACACATTAAATAAGTAAGTAAGGAAATAAATAAAC
AAATAATAAAACAAAACTTTAGAGAGTCTGGTTGTGCTGATGCACTTTTA
TAACCTTAGTGGTAGAAATATCTATCATCTATCTATCTATCTTTCTATCT
ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATATCAAAAT
CCTGGGATTCAGGAATCACTCCCCTATCCTGCTAGACAAACCCTAGGCAC
TGAACTGAGAGACTGAATTTCTGCGCCCAGCCCCCAAAGATATGAAAGGA
CCCCCATTCAATTTACCCAAAAAAA

Query= MSMg01no460_p21.g1 MSMg01no460_p21.g1 CHROMAT_FILE:
MSMg01no460_p21.g1 PHD_FILE: MSMg01no460_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:25 2005
         (530 letters)



>mm_chr3_21907972_21908901
          Length = 930

 Score =  864 bits (447), Expect = 0.0
 Identities = 486/507 (95%), Gaps = 13/507 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctccttagctctgcataacactggcctggtgatgcacacctataattacttctgaaaat 60
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 615 tctccttagctctgcataacactggcctggtgatgcacgcctataatcacttctgaaaat 556

                                                                       
Query: 61  agaggtagaaggaacagggattcaaaagtcatcttattctacaaagggaatttgatgtca 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agaggtagaaggatcagggattcaaaagtcatcttattctacaaagggaatttgatgtca 496

                                                                       
Query: 121 gccgtggatgatgatgaacaggacatgatgaacgaacaatatgcctgaaaattccatgac 180
           |||||||||             ||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gccgtggat-------------acatgatgaacgaacaatatgcctgaaaattccatgac 449

                                                                       
Query: 181 ctgaatttgattcccagaacccattcagtgggggctgaagaggtacttggtcttctgagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctgaatttgattcccagaacccattcagtgggggctgaagaggtacttggtcttctgagg 389

                                                                       
Query: 241 atctgagttcaacttctgtgcctacaaggtgactcctgataatccataacctcttcaggc 300
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 acctgagttcaacttctgtgcctacaaggtgactcctgataatccataacctcttcaggc 329

                                                                       
Query: 301 accaggcttgcatgtggtgcacatacactctctgggaaaaccacttatacacattaaata 360
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 328 accaggcttgcatgtggtgcacatacacactctgggaaaaccacttatacacattaaata 269

                                                                       
Query: 361 agtaagtaaggaaataaataaacaaataataaaacaaaactttagagagtctggttgtgc 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 268 agtaagtaaggaaataaataaacaaataatgaaacaaaactttagagagtctggttgtgc 209

                                                                       
Query: 421 tgatgcacttttataaccttagtggtagaaatatctatcatctatctatctatctttcta 480
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 208 tgatgcacttttataaacttagtggtagaaatatctatcatctatctatctatctatcta 149

                                      
Query: 481 tctatctatctatctatctatctatct 507
           |||||||||||||||||||||||||||
Sbjct: 148 tctatctatctatctatctatctatct 122


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)