Query= MSMg01no461_a21.b1 MSMg01no461_a21.b1 CHROMAT_FILE:
MSMg01no461_a21.b1 PHD_FILE: MSMg01no461_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:30 2005
(244 letters)
>mm_chr3_88236379_88237022
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 tcaaactcagaaatccgcctgcctctacctcccaactgctgggattaaaggtgtatgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaactcagaaatccgcctgcctctacctcccaactgctgggattaaaggtgtatgcca 260
Query: 61 ccaccgcccggacaatcccttgcgggtcttctggaagagcagcatgttccctttcttaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaccgcccggacaatcccttgcgggtcttctggaagagcagcatgttccctttcttaac 320
Query: 121 tgctgagccagctctccagcttctgcttgtctgtatgtttgcttgcttgtttattaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tgctgagccagctctccagcttctgcttgtctgtatgtttgcttgcttgcttattaagtg 380
Query: 181 tgtgtatgtgtgtgtgtgtatactagaggagggagtcagatatcctagaactgggtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtatgtgtgtgtgtgtatactagaggagggagtcagatatcctagaactgggtttac 440
Query: 241 aagc 244
||||
Sbjct: 441 aagc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_a21.g1 MSMg01no461_a21.g1 CHROMAT_FILE:
MSMg01no461_a21.g1 PHD_FILE: MSMg01no461_a21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:30 2005
(441 letters)
>mm_chr3_88419175_88420015
Length = 841
Score = 762 bits (394), Expect = 0.0
Identities = 430/442 (97%), Gaps = 2/442 (0%)
Strand = Plus / Minus
Query: 1 cacagccctcaaatagctctccttagactcattttccatcagccggttatctgccatccg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cacagccctcaaatagctctccttagactcattttccatcagccggttatctgccatcca 582
Query: 61 aagcccacccgtggcacccctgtccatccaacagcagaatggccagctcccccatatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aagcccacccgtggcacccctgtccatccaacagcagaatggccagctcccccatatgtc 522
Query: 121 tctgacaacagcaagcaaatctctctctgctatccggcagattctgtagggtttggctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tctgacaacagcaagcaaatctctctctgctatccggcagattctgtagggtttggctac 462
Query: 181 tccttttctgccccatcccttcagtctactgcacaacaaggcggcaactcaggaaaatgg 240
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 461 tccttttctgccccatctcttcaggctactgcacaacaaggcggcaactcaggaaaatgg 402
Query: 241 cctctcctcataagcatgggggggggggaagccacagtgtttgaagaagcagggagtcgt 300
|||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 401 cctctcctcagaagcatgggggggggggaa-ccacagtgtttgaagaagcagggagtcat 343
Query: 301 cgggctacaaagcccacacccatcactcctccatccaggcctgttgtgggctttcagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 342 cgggctacaaagcccacacccatcactcctccatccaggcctgttgtgggctttcaggat 283
Query: 361 cccccaaactcaccatttgctgaggtctgtgacataggactgagatgagttacctgga-g 419
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
Sbjct: 282 cccccaaactcaccatttgctgaggtctgtgacataggactgaggtgagttacctgcaag 223
Query: 420 gtatactaggaaaagagaggag 441
| |||| |||||||||||||||
Sbjct: 222 gcatacaaggaaaagagaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
