Query= MSMg01no461_n02.b1 MSMg01no461_n02.b1 CHROMAT_FILE:
MSMg01no461_n02.b1 PHD_FILE: MSMg01no461_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:34 2005
(198 letters)
>mm_chr3_140763362_140763959
Length = 598
Score = 377 bits (195), Expect = e-109
Identities = 195/195 (100%)
Strand = Plus / Minus
Query: 4 ggaattctttactgtccttaagccttaaatcaaatgtctctatttttccatttatctatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggaattctttactgtccttaagccttaaatcaaatgtctctatttttccatttatctatt 339
Query: 64 attttcatgtgtaaattatcgtttgatttgtatttgtttgttttactttaaaatcatttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 attttcatgtgtaaattatcgtttgatttgtatttgtttgttttactttaaaatcatttt 279
Query: 124 ttacagaagagagatgtttactaatagaatcagcaagttttggagaatcaagtggcctct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttacagaagagagatgtttactaatagaatcagcaagttttggagaatcaagtggcctct 219
Query: 184 tctttccattatgta 198
|||||||||||||||
Sbjct: 218 tctttccattatgta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 598
Length adjustment: 8
Effective length of query: 190
Effective length of database: 590
Effective search space: 112100
Effective search space used: 112100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_n02.g1 MSMg01no461_n02.g1 CHROMAT_FILE:
MSMg01no461_n02.g1 PHD_FILE: MSMg01no461_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:34 2005
(408 letters)
>mm_chr3_140607870_140608678
Length = 809
Score = 772 bits (399), Expect = 0.0
Identities = 405/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 1 acatttctcttctagataattatcagaggatggtgttatgaaggtgtaaaataaatatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatttctcttctagataattatcagaggatggtgttatgaaggtgtaaaataaatatgc 260
Query: 61 tttacagtcaaaagagaaccacttgacaggaagaggccattcatttatatcttggtagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttacagtcaaaagagaaccacttgacaggaagaggccattcatttatatcttggtagcc 320
Query: 121 cttacagcaatttgatttggattcggatgtacagaaaataccaggttgaaaaccttcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttacagcaatttgatttggattcggatgtacagaaaataccaggttgaaaaccttcatt 380
Query: 181 cttttcctgtgccttgtgatgatctgtatcctttaaatgaaaggtcagcaaataacagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttcctgtgccttgtgatgatctgtatcctttaaatgaaaggtcagcaaataacagct 440
Query: 241 ttagaagtaaaaagaaaaatgtacaaaattataatgaaaagaaatgtgaacct-gtatgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ttagaagtaaaaagaaaaatgtacaaaattataatgaaaagaaatgtgaaccttgtatgg 500
Query: 300 ctggaaaagctaaaatattcaacatctagctatttatagaaaagctgtcctaccctatgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggaaaagctaaaatattcaacatctagctatttatagaaaagctgtcctaccctatgc 560
Query: 360 attaaatcatgtcatttggtcttagggcaagattttggaagctgtgg 406
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 attaaatcaggtcatttggtcttagggcaagattttggaagctgtgg 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 809
Length adjustment: 9
Effective length of query: 399
Effective length of database: 800
Effective search space: 319200
Effective search space used: 319200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
