Query= MSMg01no462_a18.b1 MSMg01no462_a18.b1 CHROMAT_FILE:
MSMg01no462_a18.b1 PHD_FILE: MSMg01no462_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:53 2005
(508 letters)
>mm_chr3_52430679_52431589
Length = 911
Score = 899 bits (465), Expect = 0.0
Identities = 496/507 (97%), Gaps = 3/507 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtagagatcttttgtatggttttttt-gttctcaagtcctcgtggcaacctgg 63
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattcagtagagagcttttgtatggttttttttgttctcaagtcctcgtggcaacctgg 264
Query: 64 gcacactcccagatgtgagatgcctgttgtccagatgtttctctggacaactctcagtac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcacactcccagatgtgagatgcctgttgtccagatgtttctctggacaactctcagtac 324
Query: 124 tgggtggacctagaggatgctccacacagaaacatttgtccattagcagtcacctgttgt 183
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 325 tgggtggacctagaggatgctccacacagaaacatttgtccatttgcagttacctgttgt 384
Query: 184 acaggattggtggctctctccagtgcagttctgtgaaccagagcattttggggggttggg 243
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 385 acaggatcggtggctctctccagtgtagttctgtgaaccagagcattttggggggttggg 444
Query: 244 gaatcagcaaaggacttatgaaagcctgggcaatccacatgacatgctctctgagcgact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaatcagcaaaggacttatgaaagcctgggcaatccacatgacatgctctctgagcgact 504
Query: 304 ctagtcctgttgccgtggtgattcttctggatagagcacaaggcattggctgctttaata 363
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 ctagtcctgttgccgtggtgattcttctggatggagcacaaggcattggctgctttaata 564
Query: 364 aaggtacccctggctgacaaatagaacctcttccttgctttagtggaaacaaagctatta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaggtacccctggctgacaaatagaacctcttccttgctttagtggaaacaaagctatta 624
Query: 424 actagtagttttttatttttaactacctgtgctatcttggaaaaaaaa--tctccctgag 481
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 625 actagtagttttttatttttaactacctgtgctatcttggaaaaaaaaaatctccccgag 684
Query: 482 ggaaagtagagtttttgtgattaactt 508
||||||| |||||||||||||||||||
Sbjct: 685 ggaaagtggagtttttgtgattaactt 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 911
Length adjustment: 10
Effective length of query: 498
Effective length of database: 901
Effective search space: 448698
Effective search space used: 448698
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_a18.g1 MSMg01no462_a18.g1 CHROMAT_FILE:
MSMg01no462_a18.g1 PHD_FILE: MSMg01no462_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:54 2005
(476 letters)
>mm_chr10_56762108_56762983
Length = 876
Score = 165 bits (85), Expect = 8e-45
Identities = 109/117 (93%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 301 tgctccaccagactcca-acagagtgcatttcccgtccctactctccctttgtttccgac 359
|||||||||||||| || |||||| |||||||| |||||||||||||||||||||| |||
Sbjct: 616 tgctccaccagact-cagacagagcgcatttcctgtccctactctccctttgtttctgac 558
Query: 360 tgatttatttctgtatatattcaaccaatactactgaagcactaaattatttaagag 416
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 557 agctttatttctgtatatattcaaccaatactactaaagcactaaattatttaagag 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
