Query= MSMg01no462_i11.b1 MSMg01no462_i11.b1 CHROMAT_FILE:
MSMg01no462_i11.b1 PHD_FILE: MSMg01no462_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:34 2005
(438 letters)
>mm_chr3_127610002_127610839
Length = 838
Score = 557 bits (288), Expect = e-163
Identities = 324/336 (96%), Gaps = 4/336 (1%)
Strand = Plus / Minus
Query: 105 ttcttcctcttctccttcttctttttgatggttatttttgagacagggtttctctgtgta 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 812 ttcttcctcttctccttcttctttttgatggttatttttgagacagggtttctctgt-ta 754
Query: 165 gccctggttgttctggaactcactttgtagaccaggttggcctcgaactcagaaatctgc 224
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gccctggctgtcctggaactcactttgtagaccaggttggcctcgaactcagaaatctgc 694
Query: 225 ctgcctctgcct-cttagtgcnt-ggattaaaggcgtgcaccaccaccgcccggcttgtt 282
|||||||||||| | ||||| | ||||||||||| ||||||||||||||| ||||||||
Sbjct: 693 ctgcctctgcctcccaagtgc-tgggattaaaggcatgcaccaccaccgcctggcttgtt 635
Query: 283 tgcttcttctttaagacaggttctcaccagataaagtcggtgttctggactccaagggta 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgcttcttctttaagacaggttctcaccagataaagtcggtgttctggactccaagggta 575
Query: 343 ccccatgcatgtccacagacagacatgtaggcagaacccattcatacaaaataaaaatgg 402
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ccccatgcatgtccacagacagacatgtaggcagaacccattcatacaaaataaaaatgt 515
Query: 403 atgtgagcttgcctgaattcgatttgcatgccatgt 438
||||||||||||||||||||||| ||||||||||||
Sbjct: 514 atgtgagcttgcctgaattcgatatgcatgccatgt 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_i11.g1 MSMg01no462_i11.g1 CHROMAT_FILE:
MSMg01no462_i11.g1 PHD_FILE: MSMg01no462_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:34 2005
(245 letters)
>mm_chr3_127405022_127405666
Length = 645
Score = 397 bits (205), Expect = e-115
Identities = 235/245 (95%)
Strand = Plus / Plus
Query: 1 tttcagaatccaggataggaagagagattatttatgggatattctcaaagatcacgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcagaatccaggataggaagagagattatttatgggatattctcaaagatcacgacag 260
Query: 61 taatactacctttcttctaaaagtcacccatagtccatgtccctgtctttgaagcaacca 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatactacctttcttctaaaagccacccatagtccatgtccctgtctttgaagcaacca 320
Query: 121 tgcgctttgctacttgagatccttctccacccctggccccaccagagcacagtaaacctg 180
|||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 tgcgttttgcttcttgatatccttctccacccctggccccaccagagcgcagtaaacctg 380
Query: 181 ataatatctgtgtgacacatgactttgaccacaggaaaataaacctcgaaatgtcaaact 240
| ||||||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||
Sbjct: 381 agaatatctgtgtgacacatggctttgaccacgggaaaatgaacctcaaaatgtcaaact 440
Query: 241 aagac 245
|||||
Sbjct: 441 aagac 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
