MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-463J24
Chromosome	3 (Build37)
Map Location	30,350,062 - 30,350,499
singlet/doublet	singlet
Overlap gene	Mds1
Upstream gene	6130401L20Rik, LOC100040676, Evi1
Downstream gene	LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7, Tloc1, Gpr160, Phc3, LOC100040809, Prkci, Skil, Cldn11, Slc7a14
Link	Open Mouse BAC browser

Click to get alignment info.

name	6130401L20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75740 MGI:1922990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 1 Protein

name	LOC100040676 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040676
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Evi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14013 MGI:95457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mds1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17251 MGI:1329024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100040734 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040749 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Arpm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76652 MGI:1923902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mynn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80732 MGI:1931415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71827 MGI:1919077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930558O21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68307 MGI:1915557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E230002P03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320352 MGI:2443864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Samd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75953 MGI:1923203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tloc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69276 MGI:1916526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr160 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 33 ESTs, 3 Proteins

name	Phc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241915 MGI:2181434
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040809 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040809
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Prkci (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18759 MGI:99260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Skil (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20482 MGI:106203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cldn11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18417 MGI:106925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc7a14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241919 MGI:3040688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6130401L20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250829 GeneID:75740 MGI:1922990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein product : RIKEN cDNA 6130401L20 gene, transcript variant 1 transcript_id : XM_130829.7

name	LOC100040676 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250858 GeneID:100040676
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040676 transcript_id : XM_001475059.1

name	Evi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679704 GeneID:14013 MGI:95457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ecotropic viral integration site 1 transcript_id : NM_007963.1

name	Mds1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130468 GeneID:17251 MGI:1329024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myelodysplasia syndrome 1 homolog (human) transcript_id : NM_021442.2

name	LOC100040727 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250862 GeneID:100040727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040727 transcript_id : XM_001475142.1

name	Arpm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376348 GeneID:76652 MGI:1923902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin related protein M1 transcript_id : NM_029690.2

name	Mynn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41056112 GeneID:80732 MGI:1931415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myoneurin transcript_id : NM_030557.2

name	Lrrc34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625842 GeneID:71827 MGI:1919077
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 34 transcript_id : NM_027941.1

name	4930558O21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286819 GeneID:68307 MGI:1915557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930558O21 gene transcript_id : NM_026668.2

name	Samd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802080 GeneID:75953 MGI:1923203
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sterile alpha motif domain containing 7 transcript_id : NM_029489.2

name	Tloc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370366 GeneID:69276 MGI:1916526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocation protein 1 transcript_id : NM_027016.2

name	Gpr160 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369476 GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 3 Proteins product : G protein-coupled receptor 160, transcript variant 4 transcript_id : XM_977547.1

name	Gpr160 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369478 GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 30 ESTs, 3 Proteins product : G protein-coupled receptor 160, transcript variant 3 transcript_id : XM_896590.2

name	Gpr160 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250831 GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 3 Proteins product : G protein-coupled receptor 160, transcript variant 1 transcript_id : XM_130823.7

name	Phc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24025667 GeneID:241915 MGI:2181434
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polyhomeotic-like 3 (Drosophila) transcript_id : NM_153421.1

name	Prkci (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778988 GeneID:18759 MGI:99260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, iota transcript_id : NM_008857.3

name	Skil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84875516 GeneID:20482 MGI:106203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SKI-like transcript_id : NM_011386.2

name	Skil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84875519 GeneID:20482 MGI:106203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SKI-like transcript_id : NM_001039090.1

name	Cldn11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130649 GeneID:18417 MGI:106925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 11 transcript_id : NM_008770.2

name	Slc7a14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254250 GeneID:241919 MGI:3040688
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 transcript_id : NM_172861.2

name	6130401L20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250830 GeneID:75740 MGI:1922990
definition	codon_start : 1 product : hypothetical protein LOC75740 isoform 1 protein_id : XP_130829.6

name	LOC100040676 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250859 GeneID:100040676
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475109.1

name	Evi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679705 CCDS:CCDS17281.1 GeneID:14013 MGI:95457
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0042127 - regulation of cell proliferation [Evidence IMP] codon_start : 1 product : ecotropic viral integration site 1 protein_id : NP_031989.1

name	Mds1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946816 GeneID:17251 MGI:1329024
definition	codon_start : 1 product : myelodysplasia syndrome 1 protein homolog protein_id : NP_067417.1

name	LOC100040727 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250863 GeneID:100040727
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475192.1

name	Arpm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037457 CCDS:CCDS17283.1 GeneID:76652 MGI:1923902
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : actin related protein M1 protein_id : NP_083966.1

name	Mynn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41056113 CCDS:CCDS17284.1 GeneID:80732 MGI:1931415
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : myoneurin protein_id : NP_085034.2

name	Lrrc34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625843 GeneID:71827 MGI:1919077
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 34 protein_id : NP_082217.1

name	4930558O21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286820 GeneID:68307 MGI:1915557
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68307 protein_id : NP_080944.2

name	Samd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037437 CCDS:CCDS17285.1 GeneID:75953 MGI:1923203
definition	codon_start : 1 product : sterile alpha motif domain containing 7 protein_id : NP_083765.1

name	Tloc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930429 CCDS:CCDS17286.1 GeneID:69276 MGI:1916526
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocation protein 1 protein_id : NP_081292.1

name	Gpr160 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51707593 GeneID:71862 MGI:1919112
definition	codon_start : 1 product : G protein-coupled receptor 160 isoform 1 protein_id : XP_130823.3

name	Gpr160 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82889098 GeneID:71862 MGI:1919112
definition	codon_start : 1 product : G protein-coupled receptor 160 isoform 3 protein_id : XP_901683.1

name	Gpr160 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369477 GeneID:71862 MGI:1919112
definition	codon_start : 1 product : G protein-coupled receptor 160 isoform 4 protein_id : XP_982641.1

name	Phc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24025668 CCDS:CCDS17288.1 GeneID:241915 MGI:2181434
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007275 - development [Evidence IEA] codon_start : 1 exception : mismatches in translation function : developmental regulator note : polyhomeotic 3 product : polyhomeotic-like 3 protein_id : NP_700470.1

name	Prkci (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778989 CCDS:CCDS17289.1 GeneID:18759 MGI:99260
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS]; GO:0000133 - polarisome [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0004700 - atypical protein kinase C activity [Evidence IEA] [Evidence ISS]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005543 - phospholipid binding [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007015 - actin filament organization [Evidence IMP]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence ISS]; GO:0045197 - establishment and/or maintenance of epithelial cell polarity [Evidence ISS]; GO:0035089 - establishment of apical/basal cell polarity [Evidence IMP]; GO:0042462 - eye photoreceptor cell development [Evidence IMP]; GO:0045216 - intercellular junction assembly and maintenance [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0016044 - membrane organization and biogenesis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006612 - protein targeting to membrane [Evidence ISS]; GO:0046903 - secretion [Evidence ISS]; GO:0016192 - vesicle-mediated transport [Evidence ISS] codon_start : 1 note : protein kinase C, lambda product : protein kinase C, iota protein_id : NP_032883.2

name	Skil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84875517 GeneID:20482 MGI:106203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; ski/sno related product : SKI-like isoform a protein_id : NP_035516.2

name	Skil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84875520 GeneID:20482 MGI:106203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; ski/sno related product : SKI-like isoform b protein_id : NP_001034179.1

name	Cldn11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679186 CCDS:CCDS17290.1 GeneID:18417 MGI:106925
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence TAS] [Evidence ISS] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008366 - axon ensheathment [Evidence IMP]; GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS]; GO:0007155 - cell adhesion [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : oligodendrocyte transmembrane protein; oligodendrocyte-specific protein product : claudin 11 protein_id : NP_032796.1

name	Slc7a14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370304 CCDS:CCDS17291.1 GeneID:241919 MGI:3040688
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 7, member 14 protein_id : NP_766449.1

name	LOC100040734 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040734
definition	number : 2 pseudo : _no_value

name	LOC100040734 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040734
definition	number : 1 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 1 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 2 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 3 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 4 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 5 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 6 pseudo : _no_value

name	LOC100040809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040809
definition	number : 1 pseudo : _no_value

name	LOC100040809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040809
definition	number : 2 pseudo : _no_value

name	E230002P03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250865 GeneID:320352 MGI:2443864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : RIKEN cDNA E230002P03 gene transcript_id : XR_002334.2

clone name	MSMg01-298I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500H20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-463J24.T7 (MSMg01no463_j24.b1)	MSMg01-463J24.TJ (MSMg01no463_j24.g1)
ACC	AG548233	AG548234
length	1,114	750
length of high quality (start - end)	---	482 (83 - 564)
definition	CHROMAT_FILE: MSMg01no463_j24.b1 PHD_FILE: MSMg01no463_j24.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:38:06 2005	CHROMAT_FILE: MSMg01no463_j24.g1 PHD_FILE: MSMg01no463_j24.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:38:07 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ACAAACCAACTAACATTTCGCGTCAGCCCAAAAGAAAGAAGAACAGGTAC GTCACGCACGCNCGANAGNNNNNNNGAGNATAACCNAAAAAAAGGAGGGA GAGAGATGCCGAGNGNANACAGCTGAGNACAGCCGGACGCGACCACGTTT GTACGCCCCCATAGAGAGAGCCGGGCCTCGCTTCTTTTCCTGCCCGCTGC GCGTGCCTGATGACTAGTATGGTGGAGAGGTAGACCTCAACGCAACGCAA TATAGCAGATAGAGAGTATTATCGTGATTATGGCGGTAGTTGAATCGCTT TACATGCGTGTTAGATTTATATGAGCTATTGATAGATTTTAATATATATC TGACTAAGGCATGATAATTGAAGCAATAGAGTACACTATGGGCGCGCGCT CTGAGAGAGAAGAAGAACATAAACAAAGACCCACTATTCTTTTTCTTTAA TACTAACCTCCACACCCGACTCACGCTCAACACACGCCCTCATATATCTC ACTTTCTACCATCACACCATCACATCCGCTGATATATCCGCCACATTCCC CTACTTACACACTCNCAATCTGTCTGTTGTCATGTTTTCTCTCCACTTCT CCGCTCTGGTCTATCTCCTCGTCTATCACTTTATATATACCTCCTCATTC TATTACTCCTCGTAACCTCATCACTCTCTAACCCATACACATCATTACTA AACACTTACGCGCTCACAGTATCTCTCTACTATACTATATCTATATCATA CTCTCTTTATCATACTTCATCGCCTCTATATATGTTCTCCGTCCGCGCTC TTAACTCGTATACACTTACATACACCTACCTCCACCATCCAACTCCATAT ATGCTTACTATATTTACATCACTATTATCATCCTCTTACTCTCTATATAA TCCCAACCACCTTTATATTCCTCCACACATATACTCTACTCCTACTATTA TTACTCGACCATCTATTCTCATTATATACCTTTACATCTACATCTACTCA TACCTACGACACGCATGTTCCGCTCTTATACTCCCACGCAGTATTGTTAA CTCCTCCTGTCCATGATCAACTAAACTCACATCTTTCCTCCTCTATATTC CTCATACACGACAG	CCCTTTCTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCTTCCTTCAAAAAGG GAGCTTATGACATTTTTCACTTATTTGAGTTTTATATTCATGTTATTATT TCCTTAAGGGGCAGTATCATAAAAAATAAACATGGTATTTTTTTTTCTGT TTCAAATTTCATTTTTAATTTCACCTTATTCATGTGTATGGGTGTTCTGC CTGCATGTGTGGCTGTGTATCACGTTCATGCCCAGTGCCCACAGAGACCA GAAGAAGGCACTGGATCCCCTGGAACTAGAGTTACAGATTTTTATTAGCT GCCATGTGGGTGCTGGGAATTGAATCTTGGTCCTTGACTGTGGAACCATC TCTCTAACGCTGCATGTGGCATGGTTTTTAGTCTTTTTTTTTTTTGTATT CTTGAGTCCAAGAGTCAGATTAATTAATGGCACACTTTCCCCAGAGTAGC AGAACGAACCAGGAGGACCTGAGTTTGAATTCTCTCTCTGCTGTTTCCTG CTGCAGCCCTTGGGAGAATTGCTGATCTTCTCAGGTTTAAATGAAGTTTT ACAGCGGGTTTGCTGGGAAGACTTGAGATGGCAGGCTCCACATTGTCTCT TGGAGGTTATTTTCCTCTCCTTTTATACTTCGAGCCAAATGGGCCTCCTG GGGGGGTGAATCTAACCTTTTTACTGGGGTTAAAAGTAGGGCCCCCCTTA
quality values	Open. Hide. 11 14 12 13 15 10 10 7 7 7 7 8 8 8 8 8 8 13 12 10 10 12 10 10 10 9 8 6 6 6 8 8 13 8 8 11 10 10 9 9 9 6 7 6 6 6 6 7 7 7 6 6 6 6 6 6 6 6 8 7 3 0 3 7 3 0 3 3 0 0 0 0 0 0 0 3 9 3 0 3 6 6 6 6 3 0 3 6 7 15 14 14 8 8 8 8 6 8 10 10 8 13 15 17 11 8 8 8 8 8 10 7 3 0 3 0 3 0 3 8 8 8 9 10 12 12 3 0 3 10 10 10 8 8 8 8 8 9 8 8 8 8 8 8 6 6 6 8 8 6 6 6 6 8 8 10 13 18 15 13 13 14 14 14 14 10 10 8 10 8 10 6 7 8 8 10 8 8 8 8 8 8 8 10 10 15 18 11 11 10 10 12 10 10 7 7 8 8 8 8 8 8 8 8 6 6 8 8 10 10 10 9 8 8 6 6 8 8 8 9 9 9 9 8 8 8 8 8 8 8 8 8 10 8 8 8 8 10 10 10 10 11 11 11 11 11 11 11 8 8 8 8 8 8 8 8 8 10 9 9 8 10 11 10 10 10 12 10 9 9 10 8 8 6 6 8 6 6 6 6 9 10 10 8 8 8 8 8 8 8 8 8 10 9 9 8 8 10 10 8 8 8 8 8 6 6 8 6 7 8 10 12 11 11 11 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 13 10 10 10 10 10 11 8 8 8 8 10 8 12 10 12 8 8 8 6 6 8 8 8 6 8 8 6 8 6 6 8 8 8 6 6 8 8 9 9 9 9 11 8 6 6 6 8 8 10 10 10 11 6 6 8 8 8 8 8 8 8 9 11 8 8 8 8 6 6 6 6 10 10 8 6 6 8 8 8 8 8 8 8 6 6 6 6 8 8 9 8 8 8 8 8 8 10 13 8 8 8 8 8 8 8 9 9 11 10 13 12 12 10 10 9 9 8 8 8 6 8 8 6 6 8 6 10 8 8 8 8 8 8 8 6 6 6 6 6 6 8 6 6 8 12 13 10 8 8 8 6 6 6 6 8 10 8 8 8 10 8 6 8 8 8 8 8 8 8 8 8 11 11 8 8 8 6 6 7 7 10 8 9 10 15 13 12 11 10 8 8 8 8 8 8 11 8 8 8 8 8 8 8 8 8 11 13 9 8 8 10 10 8 8 8 8 8 8 8 10 8 8 8 10 8 8 8 8 8 8 8 8 3 0 3 8 8 8 10 9 11 10 11 11 8 8 8 8 8 8 7 6 8 8 11 11 9 16 16 25 15 12 6 6 10 10 8 6 6 8 6 7 8 10 8 6 6 6 6 6 6 8 7 6 8 8 9 8 8 8 8 10 10 10 9 9 8 8 8 8 8 8 9 9 10 10 10 6 6 6 6 8 8 8 8 8 8 8 8 8 8 6 7 6 6 8 10 9 10 8 8 8 8 8 9 9 10 8 8 8 8 8 8 13 10 8 8 8 8 8 11 8 8 8 8 8 9 10 12 19 20 20 20 18 22 12 12 8 8 8 8 6 7 8 8 8 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 13 12 12 12 13 10 10 10 10 8 8 8 8 6 7 8 8 8 8 7 7 8 8 8 8 8 8 8 8 9 9 9 13 10 12 11 17 10 10 9 7 11 8 7 6 8 8 8 8 10 8 8 8 8 10 8 8 8 8 9 9 9 10 12 12 9 9 8 8 10 9 8 8 8 8 8 9 9 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 6 8 8 8 8 8 8 8 10 10 10 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 6 6 6 8 9 10 9 9 9 10 9 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 15 8 8 8 8 8 8 8 8 8 9 9 11 11 9 10 10 10 13 13 13 11 11 11 8 8 7 7 7 11 12 12 10 12 10 10 10 8 8 8 8 8 8 8 8 8 13 13 8 10 10 8 8 8 8 6 6 6 6 8 6 6 10 8 12 8 13 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 10 10 10 8 8 8 8 8 8 8 17 11 6 6 6 6 8 8 8 8 6 6 8 8 9 10 10 10 10 8 6 10 6 6 8 8 8 8 8 8 8 8 8 6 6 6 10 8 8 8 6 6 6 6 7 8 8 8 8 8 8 6 6 8 6 6 8 6 6 8 8 6 8 8 8 8 8 8 6 6 10 6 6 6 6 6 8 8 10 10 6 6 8 8 8 8 8 8 8 8 8 8 9 9 6 6 6 6 6 6 8 8 10 8 6 6 6 6 8 8 8 8 8 8 10 8 11 10 10 10 18 16 11 9 9 9 9 8 8 7 7 8 10 6 6 6 6 6 6 6 6	Open. Hide. 7 7 7 7 6 8 8 6 6 6 8 8 9 9 9 9 15 19 33 23 23 19 17 16 27 33 39 33 33 33 33 41 41 42 50 47 41 39 25 25 9 9 11 12 12 9 15 15 18 14 19 12 26 30 33 33 33 33 33 47 47 59 50 50 50 42 25 22 10 13 8 8 8 8 8 7 8 12 15 15 21 22 37 39 43 48 50 57 57 57 36 35 37 37 37 47 59 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 38 34 22 22 14 14 14 16 30 41 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 54 54 59 59 68 68 68 68 68 68 68 68 68 59 46 43 43 43 43 43 57 57 57 47 43 39 43 43 57 57 48 57 48 48 48 48 47 47 39 47 47 47 47 59 47 41 41 43 37 41 39 41 39 39 40 42 47 48 50 48 59 47 43 43 46 39 43 47 47 48 48 42 41 41 39 39 44 41 31 29 24 25 34 34 28 32 32 29 29 32 39 35 32 28 32 43 41 37 34 39 39 39 41 46 46 46 46 34 34 25 20 20 16 16 18 30 30 26 34 23 23 23 26 26 30 35 28 36 39 39 37 29 14 18 11 12 12 14 14 14 19 19 21 30 15 23 23 26 28 31 28 28 18 16 17 19 22 29 18 22 22 17 13 11 9 10 9 8 15 25 28 20 20 20 22 19 19 22 26 24 27 21 24 15 15 13 19 19 9 9 9 11 11 17 18 9 7 7 8 8 10 19 34 20 16 11 9 9 7 8 8 11 9 9 11 12 12 12 12 12 12 14 14 9 9 9 9 9 10 11 12 9 9 8 7 7 7 7 8 10 10 13 15 16 12 11 11 10 12 12 10 9 8 8 7 8 8 8 8 8 8 9 9 8 8 11 12 12 12 16 11 10 9 9 9 7 7 8 8 8 8 8 8 10 14 18 18 18 18 11 10 8 8 8 8 9 8 8 8 9 9 12 7 6 6 6 8 8 10 10 10 10 10 10 9 10 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no463_j24.g1 MSMg01no463_j24.g1 CHROMAT_FILE:
MSMg01no463_j24.g1 PHD_FILE: MSMg01no463_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:07 2005
         (482 letters)



>mm_chr3_30349619_30350499
          Length = 881

 Score =  826 bits (427), Expect = 0.0
 Identities = 436/439 (99%), Gaps = 2/439 (0%)
 Strand = Plus / Minus

                                                                       
Query: 45  gagttttatattcatgttattatttccttaaggggcagtatcataaaaaataaacatggt 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gagttttatattcatgttattatttccttaaggggcagtatcataaaaaataaacatggt 822

                                                                       
Query: 105 a-tttttttttctgtttcaaatttcatttttaatttcaccttattcatgtgtatgggtgt 163
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 attttttttttctgtttcaaatttcatttttaatttcaccttattcatgtgtatgggtgt 762

                                                                       
Query: 164 tctgcctgcatgtgtggctgtgtatcacgttcatgcccagtgcccacagagaccagaaga 223
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tctgcctgcatgtgtggctgtgtatcacgttcatgcccagtgcccacagagaccagaaga 702

                                                                       
Query: 224 aggcactggatcccctggaactagagttacagatttttattagctgccatgtgggtgctg 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aggcactggatcccctggaactagagttacagatttttattagctgccatgtgggtgctg 642

                                                                       
Query: 284 ggaattgaatcttggtccttgactgtggaaccatctctctaacgctgcatgtggcatggt 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggaattgaatcttggtccttgactgtggaaccatctctctaacgctgcatgtggcatggt 582

                                                                       
Query: 344 ttttagtcttttttttttttgtattcttgagtccaagagtcagattaattaatggcacac 403
           |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 581 ttttagtc-tttttttttttgtattcttgagtccaagagtcagattaattagtggcacac 523

                                                                       
Query: 404 tttccccagagtagcagaacgaaccaggaggacctgagtttgaattctctctctgctgtt 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tttccccagagtagcagaacgaaccaggaggacctgagtttgaattctctctctgctgtt 463

                              
Query: 464 tcctgctgcagcccttggg 482
           |||||||||||||||||||
Sbjct: 462 tcctgctgcagcccttggg 444


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 881
Length adjustment: 10
Effective length of query: 472
Effective length of database: 871
Effective search space:   411112
Effective search space used:   411112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information