CCGTTTTTGTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCTTAATTTTTCCATTCTTTATTGAATCTATTTCTA
ACTTCATGTCTTGAATGGTTTTCTTAATTTCCTTACACCTTTGTTTGTGT
TTTCCTGGATTTCTTTAAAGGATTTATTAATTTCCTTTTTAAGCACTTTC
ATCATATTCATAAAGGTTGTTTTAAGGTCTTTTTCTTGTGCTTGAAATAT
GATTCAGGGCATGCTATTGTAAGATAGCTGAGTTTTACTGAAGACATATT
ACCCTGGCTTTTATTAACTGTGTTTTTGCACAGGTGTCTGGGTGTCTGGG
TTTGTGATAACCAGAGGTCTAGGTGCCTATTTCTGGGTTTATCTTTGTTA
GGTGGATATTTGTTCCTTGGTTTCTGTGATCTCTGGATTTTCTTAGAGCA
TGACAGCTGTGAATTTCTTGTGATCCTGTCCTGTTCAACTGGTTTATGTA
CACAGTATACCTACCTGCTGGTGTTGAATGCTTGATAGTTGGGATGACTT
GTTAAAGGAAAGTTGGTAGAAAAAGTCCTTTTTGAACCATTGGGGCGGGA
ATTCAAGGCAACAAAAACATCCCCCATTACGTTTCTCGGCTTTTAAATCC
GTTTTGAAAAACGGGCGTCTTAAATTTTCTTCTCTTTTATAAAATCGCTC
GTTATTAGTTATCACGCCTATCTTTATGTTTCCATTAATCATCCTCCTCT
TATCATCATTTCCTCTGTGCATTTCTCTCCTGTCC

CGATTTTACTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTAAATACTAAATAT
GAACAAACATCACTGTACAAAAGACCAGTTTTCAGTGGCATTGTTCCTTC
AGATGTAAACGAACAGGAGTTTTTGTTCCTTTGTAATCCTACTTTGCGTT
ATCTGAAATACTGCCTCATTTCATTTGAGGGATGCGTTTTAAGGAGATTC
TTCTTAGATTAGGTATATTTCATTTCCAGTTTAAATTTCTTAATATAAAT
TCTTAAGGAAAGCAATTAGGTTGTTTCATCCTCATTTTGTTTATTTTTTA
ATTTTAAAGACATTTCACTTATTTTAAGTATATGAGTGTTACCACCCATG
TTCCTGGGACCCAGGGAGGATAGAAGAGGGCATTGGATCCCCTGACACTG
GAAGTATATACTGTTGTGAGCCACAGTGTGGGTGCTGGGAATCAAACCTG
AATCTTCTGAGGAAGCAACAGTCCTCTTAATCCCTGAGTCATCTCTCCAG
GCCTTTCTTCCTGGGTTAGATTTCTCTACTTAAAATAAATTGGGTCTACC
AATCAGAACCTTCCAGGATATAAAAATACTTGTCTTTTTCTGTTTGGTTA
ATTTGAGCGCTTTTTAAAACTCCCTGGCCGGAAGGGGGGGGTGGCCCGGG
CAAAAATTTATTTTTATGCACCTTGGCTTGGTCAAAATATAAAAAAGGGA
TTTCTTTCCCCCAAATAAAA

Query= MSMg01no463_m23.g1 MSMg01no463_m23.g1 CHROMAT_FILE:
MSMg01no463_m23.g1 PHD_FILE: MSMg01no463_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:22 2005
         (480 letters)



>mm_chr3_79733322_79734202
          Length = 881

 Score =  868 bits (449), Expect = 0.0
 Identities = 473/481 (98%), Gaps = 1/481 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgtaaatactaaatatgaacaaacatcactgtacaaaagaccagttttcagtggcatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtaaatactaaatatgaacaaacatcactgtacaaaagaccagttttcagtggcatt 260

                                                                       
Query: 61  gttccttcagatgtaaacgaacaggagtttttgttcctttgtaatcctactttgcgttat 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 261 gttccttcagatgtaaacgaacaggagtttttgttcctttgtaattctagtttacgttat 320

                                                                       
Query: 121 ctgaaatactgcctcatttcatttgagggatgcgttttaaggagattcttcttagattag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaaatactgcctcatttcatttgagggatgcgttttaaggagattcttcttagattag 380

                                                                       
Query: 181 gtatatttcatttccagtttaaatttcttaatataaattcttaaggaaagcaattaggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatatttcatttccagtttaaatttcttaatataaattcttaaggaaagcaattaggtt 440

                                                                       
Query: 241 gtttcatcctcattttgtttatttttt-aattttaaagacatttcacttattttaagtat 299
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 gtttcatcctcattttgtttatttttttaattttaaagacatttcacttattttaagtat 500

                                                                       
Query: 300 atgagtgttaccacccatgttcctgggacccagggaggatagaagagggcattggatccc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgagtgttaccacccatgttcctgggacccagggaggatagaagagggcattggatccc 560

                                                                       
Query: 360 ctgacactggaagtatatactgttgtgagccacagtgtgggtgctgggaatcaaacctga 419
           |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 ctgagactggaagtatatactgttgtgagctacagtgtgggtgctgggaatcaaacctga 620

                                                                       
Query: 420 atcttctgaggaagcaacagtcctcttaatccctgagtcatctctccaggcctttcttcc 479
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcttttggggaagcaacagtcctcttaatccctgagtcatctctccaggcctttcttcc 680

            
Query: 480 t 480
           |
Sbjct: 681 t 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 881
Length adjustment: 10
Effective length of query: 470
Effective length of database: 871
Effective search space:   409370
Effective search space used:   409370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)