Query= MSMg01no464_g21.b1 MSMg01no464_g21.b1 CHROMAT_FILE:
MSMg01no464_g21.b1 PHD_FILE: MSMg01no464_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:12 2005
(521 letters)
>mm_chr3_17357486_17358406
Length = 921
Score = 930 bits (481), Expect = 0.0
Identities = 511/521 (98%)
Strand = Plus / Plus
Query: 1 cacagaacacagacagcttggactcttattcggaaagctgactatgaccttagtatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagaacacagacagcttggactcttattcggaaagctgactatgaccttagtatattt 260
Query: 61 tgtttatgttatcttttacttattatctgcatctcaatgcaatttattttatagatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttatgttatcttttacttattatctgcatctcaatgcaatttattttatagatttaa 320
Query: 121 tattttacaaggcctggcatttggcattctgttatcatctggtttttaaaatgttttcct 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttaccaggcctggcatttggcattctgttatcatctggtttttaaaatgttttcct 380
Query: 181 cccaaaatttaagacaatagtctcaagccaaagattttctttagtgaaggggacttataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaaaatttaagacaatagtctcaagccaaagattttctttagtgaaggggacttataa 440
Query: 241 tttttcatgattaacacttgacttaattttgagcttgttttcttgagatcttcaaaaacc 300
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 ttttccatgactaacacttgacttaattttgagcttgttttcttgagatcttcaaaatgc 500
Query: 301 tctgtgtgcttgagagtgtcattgtgtgtaacggagtcaccaaccaccttgctctccatg 360
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 tctatgtgcttgagagtgtcattgtgtgtaacgaagtcaccaaccaccttgctctccatg 560
Query: 361 agcagaaccatgagctctgggcatttaggctgtcacaaaatattagggacaaatattcca 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 agcagaaccatgagctctgggcatttaggctatcacaaaatattagggacaaatattcca 620
Query: 421 gttacacccacagtttagtaattattttaatttattcaactgatttcagacaaggacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttacacccacagtttagtaattattttaatttattcaactgatttcagacaaggacatt 680
Query: 481 atagacctctcaaatattagcactaaactgtggaaatatgt 521
| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 aaagacctctcaaatattagcactaaactgtagaaatatgt 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_g21.g1 MSMg01no464_g21.g1 CHROMAT_FILE:
MSMg01no464_g21.g1 PHD_FILE: MSMg01no464_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:12 2005
(484 letters)
>mm_chr3_17538769_17539653
Length = 885
Score = 801 bits (414), Expect = 0.0
Identities = 432/438 (98%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 1 tggcccaccaaacctcattttctcctgtttgtagcattgtttacttcagtgtttgattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tggcccaccaaacctcattttctcctgtttgtagcattgtttacttcagtgtttgattcc 379
Query: 61 tggctactgttctggagaaattgaagaagacccttattatccttatccccttcttttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tggctactgttctggagaaattgaagaagacccttattatccttatccccttcttttact 319
Query: 121 gtagaacatgtttat-ttttttttttttcgacagttctttatttttcattttcttgctta 179
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 318 gtagaacatgtttatctttttttttttttgacagttctttatttttcattttcttgctta 259
Query: 180 cggaagttttggatattattgacaatccctctttcatcctttttatctatttcagtcctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 258 cggaagttttggatattattgacaatccctctttcatcctttttatctatttcggtcctt 199
Query: 240 tttaaaaaatttttttaatccttgtttatagtccagttttcatccacctcccttgccctg 299
|| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttaaaaaaaattatttaatccttgtttatagtccagttttcatccacctcccttgccctg 139
Query: 300 acagctccccatcccatgcctcctcccgcccctggctacaggatgatgtacccacacccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 acagctccccatcccatgcctcctcccgcccctggctacaggatgatgtacccacacccc 79
Query: 360 catctccaccttaccactcctccccagtccctggggcctcaagtctcttaagggagggtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 catctccaccttaccactcctccccagtccctggggcctcaagtctcttaagggagggtt 19
Query: 420 aagttcatcttccctaag 437
||||||||||||||||||
Sbjct: 18 aagttcatcttccctaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 885
Length adjustment: 10
Effective length of query: 474
Effective length of database: 875
Effective search space: 414750
Effective search space used: 414750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
