Query= MSMg01no464_i20.b1 MSMg01no464_i20.b1 CHROMAT_FILE:
MSMg01no464_i20.b1 PHD_FILE: MSMg01no464_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:21 2005
(340 letters)
>mm_chr3_138984124_138984864
Length = 741
Score = 574 bits (297), Expect = e-168
Identities = 329/345 (95%), Gaps = 11/345 (3%)
Strand = Plus / Minus
Query: 1 ttcaagcccctgcctccggagcataactaatgtgtcagctaagatatagctttga-tttt 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 540 ttcaagcccctgcctccggagcataactaatgtgtcagctaagatatagctttgattttt 481
Query: 60 tttttcacttttcttcagtttatgcagggagtgtccccatcaccttctttggcttcgttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tttttcacttttcttcagtttatgcagggagtgtccccatcaccttctttggcttcgttt 421
Query: 120 gacctcttttgttaatttttactagatcagctccatccatggacatataaaggtcctaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gacctcttttgttaatttttactagatcagctccatccatggacatataaaggtcctaaa 361
Query: 180 catattgggctctagcatgctagaaacgtatattcttcattcaagtcatcaaaattttga 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 catattgagctctagcatgctagaaacgtatattcttcattcaagtcatcaaaattttga 301
Query: 240 ttttttt-----gagaattctatatccaagataatttcctcccacacattatccaatgcc 294
| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 300 -----gtacaaggagaattctatatccaagataatttcctcccacacattagccaatgcc 246
Query: 295 tgcctctatgctctctgggcgctaagcgttactaacactgtggaa 339
|||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 245 tgcctctacgctctctgggcgctaagcattactaacactgtggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 741
Length adjustment: 9
Effective length of query: 331
Effective length of database: 732
Effective search space: 242292
Effective search space used: 242292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_i20.g1 MSMg01no464_i20.g1 CHROMAT_FILE:
MSMg01no464_i20.g1 PHD_FILE: MSMg01no464_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:22 2005
(481 letters)
>mm_chr3_138829419_138830299
Length = 881
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%)
Strand = Plus / Plus
Query: 2 aggtgggaacctagaggcaggaactgaaatatagattgtggaggagtgctgatactgcct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aggtgggaacctagaggcaggaactgaaatatagattgtggaggagtgctgatactgcct 261
Query: 62 cactccccatggcttgcttagtctgctttcttacacaacccaggaccacctgcccaggaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cactccccatggcttgcttagtctgctttcttacacaacccaggaccacctgcccaggaa 321
Query: 122 tggtatcacccacagtgaactgggccctcccacactaataattagtcatggaaatgcacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tggtatcacccacagtgaactgggccctcccacactaataattagtcatggaaatgcacc 381
Query: 182 aaagacttgcctatgggctaatagagtagaggcattttctcagttgaagttccctcttcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaagacttgcctatgggctaatagagtagaggcattttctcagttgaagttccctcttcc 441
Query: 242 catatgaccctggcttgggaaaaaaaatctaaccaagatacaactgaatataattttctt 301
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cagatgaccctggcttgggaaaaaaaatctaaccaagatacaactgaatataattttctt 501
Query: 302 tgttctctagttggttggcttattctagaatacagactatcataaatattacagataatt 361
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgttctctatttggttggcttattctagaatacagactatcataaatattacagataatt 561
Query: 362 tccccatcaaatacataatagatattgagttctgttcaaaatcaatacatgtgttaacta 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tccccatcaaatacataatagatattgagttctgttcaaaatcaatacatgtgttaacta 621
Query: 422 tgtgttagctatataatcctcctcaaaacatggtcaaatttttgtgtgtgatttgg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgtgttagctatataatcctcctcaaaacatggtcaaatttttgtgtgtgatttgg 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
