CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAA
TTCNCACCTGAGTAACCCGACTAGGCAGAGAAGCACCTGANAAAATGCTC
AACATCCTTAATCATCATGTAAACGCAAATCAAAACAACCCTGAGATTCC
ACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAGA
TGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGA
TTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGTTCCTCAGAA
AACTGGATATAGTACTACCGTTTTTTCCAGCAATACCTCTCCTGGGCATA
TATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTT
CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCCAGATGCC
CCTCAACAGAGGAATGGATACAGAAGATGTGGTACATCTACACAATGGAG
TACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTGGCCAAATG
GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGA
ACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAA
GATACCCTTGATATAAGATACAATTTCCTAAACACATGAAACTCAAGAAA
AATGAACACTGAAGTGTGAACACTATGCCCCTCCTTAGAATGTGAGCAAA
CCACCCTTGG

AATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATCCTTGGCTGGCAAGTGATGTGTCTTA
GACCAAGTTCAATGTCATAAAAAATGCTTGAGGCTGGGTGAGTTACAAAC
AGAAGAGATGGCTTGCTCAGTGTCCTGGATTTTAAAAGTCTTCCATCAAA
GTACTGGTACTGGCAGGGTCTGGGAATTCTTACATCTCGGTCCTTCTTTG
TGTTCCAATATGAAGGAGACTTCTTGACAAAAGCAGGAAACAGGGGTGAG
AGCTCCAAGCTGAAGGCCCAACTATATACCCTGTCACATAATGTTATCAC
ATTACGTAGATAACACACATTTTCAGCCTACATCAGGTACTTTTAATCTA
AAGAAAGTGAAATCAGTATGAAAGGGAAGTAAAGATTGATAATAAGTTAG
TCCCCAAGGAGAGTACAGACACATGGTGCATACACAGCCATAAAGACAAC
ATTGCTCCATGTAAAATAACAACCAGTAAGTAGAAACACTTAGTGAGTGT
GGTAGAAGAGGATGTCAAAGCTTGACTTTCCCTAAGGAGAGGCACAGATA
ACTCTGGGGGGGGAGGTTGGACTTGATTGACCTCTTCCCCGATTTTCCGG
CCCCTGCCCTCTTTATAACGGGACTTTTTTCGGAAAACATTTTTTACTTT
GCCGTCACTTTTTTGGCGTTACCTCCTGTCTATCTATTTGTCCTTGTTTT
TCCCTCCCCTCTTTTCTTCGCCTTTCTTCCCTTTTACG

Query= MSMg01no464_m24.g1 MSMg01no464_m24.g1 CHROMAT_FILE:
MSMg01no464_m24.g1 PHD_FILE: MSMg01no464_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:42 2005
         (473 letters)



>mm_chr3_39319903_39320775
          Length = 873

 Score =  891 bits (461), Expect = 0.0
 Identities = 470/473 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atccttggctggcaagtgatgtgtcttagaccaagttcaatgtcataaaaaatgcttgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atccttggctggcaagtgatgtgtcttagaccaagttcaatgtcataaaaaatgcttgag 614

                                                                       
Query: 61  gctgggtgagttacaaacagaagagatggcttgctcagtgtcctggattttaaaagtctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gctgggtgagttacaaacagaagagatggcttgctcagtgtcctggattttaaaagtctt 554

                                                                       
Query: 121 ccatcaaagtactggtactggcagggtctgggaattcttacatctcggtccttctttgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ccatcaaagtactggtactggcagggtctgggaattcttacatctcggtccttctttgtg 494

                                                                       
Query: 181 ttccaatatgaaggagacttcttgacaaaagcaggaaacaggggtgagagctccaagctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttccaatatgaaggagacttcttgacaaaagcaggaaacaggggtgagagctccaagctg 434

                                                                       
Query: 241 aaggcccaactatataccctgtcacataatgttatcacattacgtagataacacacattt 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaggcccaactaaataccctgtcacataatgttatcacattacgtagataacacacattt 374

                                                                       
Query: 301 tcagcctacatcaggtacttttaatctaaagaaagtgaaatcagtatgaaagggaagtaa 360
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcagcctatatcaggtacttttaatctaaagaaagtgaaatcagtatgaaagggaagtaa 314

                                                                       
Query: 361 agattgataataagttagtccccaaggagagtacagacacatggtgcatacacagccata 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 313 agattgataataagttagtccccaaggagagtacagatacatggtgcatacacagccata 254

                                                                
Query: 421 aagacaacattgctccatgtaaaataacaaccagtaagtagaaacacttagtg 473
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aagacaacattgctccatgtaaaataacaaccagtaagtagaaacacttagtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space:   399569
Effective search space used:   399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)