TTTCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACCGCG
GAATTCTGAATATATCATCATTTGTTTCTAAACAGATCAAGAGCTATTTA
CCATCACAGTGTTTTGTGCACAGCTGGGTGTCTGGCAAATGTCCAATATC
CATTAACATTTAAAAATTAGTTCCATAATGCATCTTTTCTAGGGCTGGAG
AAGTACACATGGTGACACGTGTTGGGAACCAATTACACTTGCACCGCCAT
TAGTCTGCCCGCATTCGACTTCCCAGTAAATGCAGGCTAATTTAGTTTCC
AGAATGGCGTGTCTATTTTCATACAATAACCTCAGAGAAGGCCGGGTATC
TGAAGATGGATAGTGTAGCTGCTGCTAGACGACAAACATGAGTTCTCCTG
TGGAAGCACCAGGGTGCATGGCACAACTGTGCCTTGAGTTTCTGCACAGT
TCTTGTAGAGCATTTTTTCTAGTCAGGTTGAGACTACAGGGCAGACACTT
AGCATATTTCAATAACCATTCGTAATACCACTTTGTAAGTCAGCTAATAA
CTTTACATGACGGTATTTCTCTTTCTCTCTCTCTCCCCCTCTCTTTTTCT
CTCTTTTCCTTCTCCCCTCCCCCTTTTTTTCTTTTCCTTTTTCCTTTCCT
CTTTCCTTTAGCTTCTTTTACCTTTTTTTCCTCCTATCTTTTCTATATTA
CCCATATTATTTTTTTTTTTCCCTCTTTCTTTTCCCTTCTTTCTTCTCCT
CTTTTTTTACCCTTTTATTTCTTTTCTCCCCTT

NTTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCATGACCCACAGAGCCACAGTC
TGAGGGTGGCAGGCATCAGCCTGTGGGAGATTAAGCTCATCTGCCCTCCG
CCTCCAACCCTCACCCCCCTCCGATCTCTCATTTCTCCCGTGCATTAGCC
ATCATTTTGAAAGTTTTAGTGAGTTAATTAAATTCTTCTAGTGTTGATGG
TAAGAAAGCTGAAACATTTTCAACTGAGATTGACACTACTCAAGACACAG
GCTTCGGTGGTGTTTGTTTTTTAACACTCGGATATGTCACAGGATTGCTG
TGAGAACATCTGAGAGCTATAATGAGCTAAAAGTCAAGCACAGGGGAAAA
TGTGTTCCAGACTGCTGCAGATGTTCGCAAATCAAATCATATCTCTGTGA
AATGCCATATAGAATATTCAGCTGCTGTAAGATGCAATGTGAGAGAACAG
CTCCACTGATTCGCACTGAGTTTAATTTTTTTAGCCTAAATCCTATGGAA
ATATATGGCCCTCCCATCTCTGGATACCATTAATAAAAGAAGTCCCTTTG
AATCCCACAATACCGGCGTTGAATGGAAATTTCCCTGGACATAGATACGG
CATGTCTCCTTCTTTGGATCTCTTTATATCCTCTCCTCCCCCCCTGGTAT
AATTATTATTCTTATTCTCTCCGCACTTTATGTTGATTTCACCAAATCCT
CTGTATTTCATTGTTTTTCTCCTCTTTATGTCTATCCTTCTTATTATTAA
TTATN

Query= MSMg01no466_b20.b1 MSMg01no466_b20.b1 CHROMAT_FILE:
MSMg01no466_b20.b1 PHD_FILE: MSMg01no466_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:29 2005
         (404 letters)



>mm_chr3_119227210_119228013
          Length = 804

 Score =  750 bits (388), Expect = 0.0
 Identities = 400/404 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catttgtttctaaacagatcaagagctatttaccatcacagtgttttgtgcacagctggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 catttgtttctaaacagatcaagagctatttaccatcacagtgttttgtgcacagctggg 545

                                                                       
Query: 61  tgtctggcaaatgtccaatatccattaacatttaaaaattagttccataatgcatctttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgtctggcaaatgtccaatatccattaacatttaaaaattagttccataatgcatctttt 485

                                                                       
Query: 121 ctagggctggagaagtacacatggtgacacgtgttgggaaccaattacacttgcaccgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctagggctggagaagtacacatggtgacacgtgttgggaaccaattacacttgcaccgcc 425

                                                                       
Query: 181 attagtctgcccgcattcgacttcccagtaaatgcaggctaatttagtttccagaatggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 attagtctgcccgcattcgacttcccagtaaatgcaggctaatttagtttccagaatggc 365

                                                                       
Query: 241 gtgtctattttcatacaataacctcagagaaggccgggtatctgaagatggatagtgtag 300
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtgtctaaattcatacaataacctcagagaaggccgggtatctgaagatggatagtgtag 305

                                                                       
Query: 301 ctgctgctagacgacaaacatgagttctcctgtggaagcaccagggtgcatggcacaact 360
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 304 ctgctgctagatgacaaacatgagttctcctgtggaagcaccagggtgcatggtacaact 245

                                                       
Query: 361 gtgccttgagtttctgcacagttcttgtagagcattttttctag 404
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtgccttgagtttctgcacagttcttgtagagcattttttctag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space:   314025
Effective search space used:   314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no466_b20.g1 MSMg01no466_b20.g1 CHROMAT_FILE:
MSMg01no466_b20.g1 PHD_FILE: MSMg01no466_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:29 2005
         (370 letters)



>mm_chr3_119031144_119031913
          Length = 770

 Score =  677 bits (350), Expect = 0.0
 Identities = 365/370 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatgacccacagagccacagtctgagggtggcaggcatcagcctgtgggagattaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgacccacagagccacagtctgagggtggcaggcatcagcctgtgggagattaagct 260

                                                                       
Query: 61  catctgccctccgcctccaaccctcacccccctccgatctctcatttctcccgtgcatta 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctgctctccgcctccaaccctcacccccctccgatctctcatttctcccgtgcatta 320

                                                                       
Query: 121 gccatcattttgaaagttttagtgagttaattaaattcttctagtgttgatggtaagaaa 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccatcattttgaaagttttactgagttaattaaattcttctagtgttgatggtaagaaa 380

                                                                       
Query: 181 gctgaaacattttcaactgagattgacactactcaagacacaggcttcggtggtgtttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgaaacattttcaactgagattgacactactcaagacacaggcttcggtggtgtttgt 440

                                                                       
Query: 241 tttttaacactcggatatgtcacaggattgctgtgagaacatctgagagctataatgagc 300
           |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtaacactcggatatgtcacaggattgctgtgagaacatctgagagctataatgagc 500

                                                                       
Query: 301 taaaagtcaagcacaggggaaaatgtgttccagactgctgcagatgttcgcaaatcaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaagtcaagcacaggggaaaatgtgttccagactgctgcagatgttcgcaaatcaaat 560

                     
Query: 361 catatctctg 370
           ||||||||||
Sbjct: 561 catatctctg 570


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space:   274721
Effective search space used:   274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)