Query= MSMg01no466_h10.b1 MSMg01no466_h10.b1 CHROMAT_FILE:
MSMg01no466_h10.b1 PHD_FILE: MSMg01no466_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:57 2005
(372 letters)
>mm_chr3_111850609_111851380
Length = 772
Score = 667 bits (345), Expect = 0.0
Identities = 362/373 (97%), Gaps = 10/373 (2%)
Strand = Plus / Minus
Query: 4 acgaaatctctaatcatcctgtgtattatacagaccatactatgctgatttattggccaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acgaaatctctaatcatcctgtgtattatacagaccatactatgctgatttattggccaa 309
Query: 64 atcacagagcagtaagaggacataaaagtcaccattgtctttgtgagttgatgttcttcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atcacagagcagtaagaggacataaaagtcaccattgtctttgtgagttgatgttcttcc 249
Query: 124 tttccaattatggagttgtttcattttttgtgatgtgctgttttctttttttttttttaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttccaattatggagttgtttcattttttgtgatgtgctgttttctttttttttttttaa 189
Query: 184 tttattatgtattttcctcaattacatttccaatgctatcccaaaagtcccccataccct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tttattatgtattttcctcaattacatttccaatgctatcccaaaagtcccccataccct 129
Query: 244 cc-----tttttcttccctccccacccattcccatttttttggccctggcgttcccctgt 298
|| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 128 cccccca-----cttccctccccacccattcccatttttttggccctggcgttccccagt 74
Query: 299 actggggcatattaagtttgtgtgtccaatgggactctctttccagtgatggccaaccag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 actggggcatattaagtttgtgtgtccaatgggactctctttccagtgatggccaaccag 14
Query: 359 gccatcttttgat 371
|||||||||||||
Sbjct: 13 gccatcttttgat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_h10.g1 MSMg01no466_h10.g1 CHROMAT_FILE:
MSMg01no466_h10.g1 PHD_FILE: MSMg01no466_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:57 2005
(340 letters)
>mm_chr3_111688847_111689584
Length = 738
Score = 623 bits (322), Expect = 0.0
Identities = 335/340 (98%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 agtatgtaatggcaattcttgtattggaaaagaaaaaaaggggggggggaatagaaattg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 agtatgtaatggcaattcttgtattggaaaagaaaaaaa--ggggggggaatagaaattg 258
Query: 61 ttaaggcacgatcctgttcccagtggaactgaaaatcaaaaaagcatactctcctcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttaaggcacgatcctgttcccagtggaactgaaaatcaaaaaagcatactctcctcagaa 318
Query: 121 aggtgttacagaaagggctctagggaaattttgctccagctaattaattcagtctgccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggtgttacagaaagggctctagggaaattttgctccagctaattaattcagtctgccaa 378
Query: 181 aatcttgttgcagcactcacattgtaagtctacattttgaaaattaaatgttagttttgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatcttgttgcagcactcacattgtaagtctacattttgaaaattaaatgttagttttga 438
Query: 241 tttgttaatatattaaaatgaatgcaaattatctccaatagtcactaactagcttgaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agtgttaatatattaaaatgaatgcaaattatctccaatagtcactaactagcttgaatt 498
Query: 301 ttcatttatttgcagcagttgtaggtatcaaatattcaaa 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttcatttatttgcagcagttgtaggtatcaaatattcaaa 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 738
Length adjustment: 9
Effective length of query: 331
Effective length of database: 729
Effective search space: 241299
Effective search space used: 241299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
