TTTCTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGATCCG
CGGAATTCTTGTTTTTCCAAGCTGACTGTTTGTGCCAACTTCTCTGTTTC
CCACTGGCAGAAGATGAACAAACATTGAGTTTCTTATTAAACTAAAATTC
CGCACTGATTCCTGGAAAATAAACATAACTGCAACATGTTAAATGCTTAG
ATCTCTGGCAATGATAGTGTCAGCATGCAGTTTAAAGTATCTTCATCATA
TCATTGAACTATTTAAAAACATGTTAACAAAAATAGAAACTGATTATTTA
GTAATATGACTTGTTTGTACTATAGGCCACACATGGTGACATGTCACATA
ACAGTAAGAAAGAAGACAAATAAATAAATAAATGGATTTGGCTAAACTAA
AGTAAATTAAAGATGTTCAATTAAAAAGAAGGGGCTGACACTGAACAGAT
AGCTGATGAAGAAAGAATTGTAAACCAATGGCTACAATCAGATTACCTGA
GTCTCACTGAATGTGTGCATCTGAGAGGACAATGTGGGTTCTCCATACTC
CAGTTTCAGGATGTTGAAAAAGATCTGTATAAACATGAGATGCTATTTTA
ATTGGGATACTGTGAAGGCTTTTACTCCCAGGACTGAAAATCAAAACCCT
TGTTTTCCCCTAAAAAAAAAATCTTTTATAAATGGCAAAAAAGTTCCCCC
GGTTCTTGGGGTTCACCCTTAATTTTTTTAAAAACACTTACCCCTTCCCC
CCCTCATTTTTTACTAAATAATCTG

NCCCCATGATATGGGTAGCCTGGAGGGCGCCTGCTTCCCAATTTAGGNGA
CCTATAGATGTACCGCGGAATCTTCTGTCCAAAGAAATCAAGCTATGCTC
AGGAGAGCTAACATGGGGTAGAGTTTCATGCTACTCTGAACAGACAGCTT
GTCTCTTTGGAATGTGGGACTCCCACAGGAGCACTAATGGGCACTCATGA
GAGCTAACTTGAAAAGAAGGGTATTTTGAATAAAGTTGAACAGAAAGAAG
TATACTAATATAATTTATATAAAGAGAAAGGTGGATATTGTTATATTTAC
TCACAGAAACTTTATTCTCCAAAGAAGGTAGAGAGAATTGCAAATGTTTT
ACAGGTCACTTAGATAAATAAATCCAGCCCTTTGATCTCAAAACTAGGTA
GTCTAAGTATGGTCCACATAGCTTACTTGTGAATACCCCAATTCTTATGT
ATTTTGTGCCTACCTTTAACGAACACAATATCTGGATTCTTTCCATAGTA
CTAATTATCTTATCTGATCTGAGTACGACCTTCCCTGAATTTTTATCCCT
CTTGTCGAACCTCATTATATTATGTAATATTCTTCTTTACATCTACTCCT
GACTTTGTCTCCCCCCTCCCCATGGCATTTCTCTTGCATCTACCTCTGTA
TTTACCATACATTGTCTCCTCTGTCATTCATTTCCACCTTCTTTCTTATC
TTATTTGGAACTTCTCCTTTGTATTTATTTCTTTTTCTCCATTTCTTCTC
TTCTCCGTACCTATG

Query= MSMg01no466_p14.b1 MSMg01no466_p14.b1 CHROMAT_FILE:
MSMg01no466_p14.b1 PHD_FILE: MSMg01no466_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:41 2005
         (439 letters)



>mm_chr3_112548013_112548851
          Length = 839

 Score =  797 bits (412), Expect = 0.0
 Identities = 430/438 (98%), Gaps = 5/438 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgt---ttttccaagctgactgtttgtgccaacttctctgtttcccactggca 61
           ||||||||||   |||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttgtcaatttg--aagctgactgtttgtgccaacttctctgtttcccactggca 261

                                                                       
Query: 62  gaagatgaacaaacattgagtttcttattaaactaaaattccgcactgattcctggaaaa 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaagatgaacaaacattgagtttcttattaaactaaaattccgcactgattcctggaaaa 321

                                                                       
Query: 122 taaacataactgcaacatgttaaatgcttagatctctggcaatgatagtgtcagcatgca 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taaacataactgcaacatgttaaatgcttagatctctggcaatgatagtgtcagcatgca 381

                                                                       
Query: 182 gtttaaagtatcttcatcatatcattgaactatttaaaaacatgttaacaaaaatagaaa 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtttaaagtatcttcatcatatcattgaactatttaaaaacatgttaacaaaaatagaaa 441

                                                                       
Query: 242 ctgattatttagtaatatgacttgtttgtactataggccacacatggtgacatgtcacat 301
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 442 ctgattatttagtaatatgacttgtttgtacaagaggccacacatggtgacatgtcacat 501

                                                                       
Query: 302 aacagtaagaaagaagacaaataaataaataaatggatttggctaaactaaagtaaatta 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aacagtaagaaagaagacaaataaataaataaatggatttggctaaactaaagtaaatta 561

                                                                       
Query: 362 aagatgttcaattaaaaagaaggggctgacactgaacagatagctgatgaagaaagaatt 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aagatgttcaattaaaaagaaggggctgacactgaacagatagctgatgaagaaagaatt 621

                             
Query: 422 gtaaaccaatggctacaa 439
           ||||||||||||||||||
Sbjct: 622 gtaaaccaatggctacaa 639


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space:   356900
Effective search space used:   356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)