Query= MSMg01no467_l07.b1 MSMg01no467_l07.b1 CHROMAT_FILE:
MSMg01no467_l07.b1 PHD_FILE: MSMg01no467_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:39 2005
(282 letters)
>mm_chr3_117036099_117036780
Length = 682
Score = 257 bits (133), Expect = 4e-73
Identities = 159/168 (94%)
Strand = Plus / Plus
Query: 5 catggnatgataactccttcttaaagtcaatgagtacagaaatggtaagggggacttgtc 64
||||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 catggtatgataactcttttttaaagtcaatgagtacagaaatgataagggggacttgtc 264
Query: 65 tctattactcaataccgaattaactatgtatagttttcgactggtagtttttaacattgt 124
|||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 265 tctattactcaataccaaattgactatgtatagttttcgactggtagtttccaacattgt 324
Query: 125 tatttcagatgagacatggaaatacactaagttctctgttgtgtattg 172
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 tatttcagatgagacatggaaatacactaagttctctgttgtgaattg 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no467_l07.g1 MSMg01no467_l07.g1 CHROMAT_FILE:
MSMg01no467_l07.g1 PHD_FILE: MSMg01no467_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:39 2005
(385 letters)
>mm_chr3_117198704_117199488
Length = 785
Score = 690 bits (357), Expect = 0.0
Identities = 374/383 (97%), Gaps = 6/383 (1%)
Strand = Plus / Minus
Query: 1 tgggattatcagagataacaagtcatgtttaagatctaactaagtctacaacgtactaga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 529 tgggattatcagagatcacaagtcatgtttaagatctaactaagtctacaatgtactaga 470
Query: 61 tgggatatgaatgaggtggtatgctactggtttgcagaaaatctgtgacaaacatggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tgggatatgaatgaggtggtatgctactggtttgcagaaaatctgtgacaaacatggaaa 410
Query: 121 caatgtgtgctccagtcacaaaaatatgagacaatttctgagttgctgaaagaggccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caatgtgtgctccagtcacaaaaatatgagacaatttctgagttgctgaaagaggccttc 350
Query: 181 tccctccttccagcacagtcttatttacttcccacgttcctctattctaaaatactggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tccctccttccagcacagtcttatttacttcccacgttcctctattctaaaatactggag 290
Query: 241 aagtaatacattcctgatattgtggtcatgagggttttatggtgcaatatttttaaatta 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aagtaagacattcctgatattgtggtcatgagggttttatggtgcaatatttttaaatta 230
Query: 301 tatcgtctagtctttgagagtttaatctctgtatgtgtgtgtgtgcgtgtgttgtgtgta 360
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 tatcgtctagtctttgagagtttaatctctgtatgtgtgt------gtgtgttgtgtgta 176
Query: 361 tgtgcatgtacatatgtgtgtac 383
|||||||||||||||||||||||
Sbjct: 175 tgtgcatgtacatatgtgtgtac 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
