AAATCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCACAACACCGCG
GAATTCTCTGCTCGTTTCTCAAAAGGATGACTATTAATCAATGTTCAAGA
TAATATGCGGAGAAATTATGTTTTGCTTTGCTTTGTTTTATTTTTGCTGT
TATTGATGTTGCTTTAATCTGTTGTAACTTGGCTTAGCAGCATAAGCTGT
CAAATAAACTCTTCTTATACCTCCCTTTCCTATATTCTCCTCTGCAACCA
AATTTAGAACAGCGTAAGGAAGCTTCTCCATTAAACTAGAAAGTCTGCAA
ATTCTGTGCAAATAATCAACTCTTATTTTTTTCTTTGAATTATTTTAATC
CAATCATCTATTTACACATTTTAATTGGCATTTAATAACAATTTATATTA
AGTAATATTAATTAATGGTCTACTTTCCATTTAATCAACTACATTTATGT
CTGCATTTCAAGTTTTCCAAATGTTTTCTGTCTTACATGTTGATGGATTC
TTACTCATATTTTCTAGAACATTTTTTATATATATATACATGATACTTAA
GATCATCCATGCACACGCCACCATGATAAAATATCCAGCTTATGGAAAGC
CCCCTGTTTCCTAAACCACTGGAAAATCTCAGTCTATTTGCTTGGTGTCG
GATTACAAAACCTAATATTCCCTAACTACAAATTCCTCGCTGGCTAAAAA
CAAAAAACAAAAACCTTGTGTATTAAATTCCTGACAATATAACCTAGTGA
CTTCCAAATATAN

NNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGC
AGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAG
ATCAAAAATTCAGGTGACAGCAGATGCTGTCGTGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGGGGGAGTGCAGGCATGTACAACCACTCTGGA
AATCAGTCTGGAGGTTCCTCAGAAAATTTGATATAGTACTACCGGAGGAT
CCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAA
GAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAN
ATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAGCCCAATGGATGGACCTGGGGGGCATCATCCTGA
GTGAGGTAACACCTTTCCCCAAGAAACCCCCCCCATTGGTACTCCCTCGG
AAAATGGGATATTAAGCCCCCACACCTGGGAAACCCCAGATATAACAATA
ATATTTTGTTAAAACCCTGTAACTCTCCCTAAAAAGGTAAAATGAAAAGG
GGGGACACTATAGTCCCCCCTCTTAAATTTTGGAATAATAAAACTCACTG
G

Query= MSMg01no468_k16.b1 MSMg01no468_k16.b1 CHROMAT_FILE:
MSMg01no468_k16.b1 PHD_FILE: MSMg01no468_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:58 2005
         (461 letters)



>mm_chr3_44619279_44620139
          Length = 861

 Score =  853 bits (441), Expect = 0.0
 Identities = 456/461 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgactattaatcaatgttcaagataatatgcggagaaattatgttttgctttgctttgtt 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 502 tgactattaatcaatgttcaagataatatgtggagaaattatgttttgctttgctttgtt 443

                                                                       
Query: 61  ttatttttgctgttattgatgttgctttaatctgttgtaacttggcttagcagcataagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttatttttgctgttattgatgttgctttaatctgttgtaacttggcttagcagcataagc 383

                                                                       
Query: 121 tgtcaaataaactcttcttatacctccctttcctatattctcctctgcaaccaaatttag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgtcaaataaactcttcttatacctccctttcctatattctcctctgcaaccaaatttag 323

                                                                       
Query: 181 aacagcgtaaggaagcttctccattaaactagaaagtctgcaaattctgtgcaaataatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aacagcgtaaggaagcttctccattaaactagaaagtctgcaaattctgtgcaaataatc 263

                                                                       
Query: 241 aactcttatttttttctttgaattattttaatccaatcatctatttacacattttaattg 300
           |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 262 aactctgattgttttctttgaattattttaatccaatcatctatttacatattttaattg 203

                                                                       
Query: 301 gcatttaataacaatttatattaagtaatattaattaatggtctactttccatttaatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gcatttaataacaatttatattaagtaatattaattaatggtctactttccatttaatca 143

                                                                       
Query: 361 actacatttatgtctgcatttcaagttttccaaatgttttctgtcttacatgttgatgga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 actacatttatgtctgcatttcaagttttccaaatgttttctgtcttacatgttgatgga 83

                                                    
Query: 421 ttcttactcatattttctagaacattttttatatatatata 461
           |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 82  ttcttactcatattttctagaacattttatatatatatata 42


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space:   383801
Effective search space used:   383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)