MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-468L21
Chromosome	3 (Build37)
Map Location	14,533,475 - 14,533,923
singlet/doublet	singlet
Overlap gene	Lrrcc1
Upstream gene	0710005M24Rik, LOC100041679, LOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068
Downstream gene	E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
Link	Open Mouse BAC browser

Click to get alignment info.

name	0710005M24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76897 MGI:1924147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041679 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041679
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100041667 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 273 ESTs, 15 Proteins pseudo : _no_value

name	LOC100039882 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039882
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG622229 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622229 MGI:3648364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins

name	LOC668062 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Slc7a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140918 MGI:2156159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668068 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins pseudo : _no_value

name	Lrrcc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71710 MGI:1918960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E2f5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13559 MGI:105091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810022K09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69126 MGI:1916376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 1 Protein

name	LOC100039929 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039929
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Car13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71934 MGI:1931322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545507 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545507 MGI:3645250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Car1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12346 MGI:88268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 180 ESTs, 1 Protein

name	Car3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12350 MGI:88270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Car2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12349 MGI:88269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG634323 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634323 MGI:3647002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039985 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC751864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:751864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sirpb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320832 MGI:2444824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC668101 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 14 Proteins

name	0710005M24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362122 GeneID:76897 MGI:1924147
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0710005M24 gene transcript_id : NM_178631.3

name	LOC100041679 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250624 GeneID:100041679
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : similar to LRRGT00008 transcript_id : XM_001476988.1

name	EG622229 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369224 GeneID:622229 MGI:3648364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : predicted gene, EG622229 transcript_id : XM_886644.2

name	Slc7a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366209 GeneID:140918 MGI:2156159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 transcript_id : NM_080852.2

name	Lrrcc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365220 GeneID:71710 MGI:1918960
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat and coiled-coil domain containing 1 transcript_id : NM_028915.2

name	E2f5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982404 GeneID:13559 MGI:105091
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E2F transcription factor 5 transcript_id : NM_007892.2

name	1810022K09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250626 GeneID:69126 MGI:1916376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 1 Protein product : RIKEN cDNA 1810022K09 gene transcript_id : XM_001477090.1

name	Car13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227225 GeneID:71934 MGI:1931322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 13 transcript_id : NM_024495.4

name	EG545507 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250605 GeneID:545507 MGI:3645250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG545507 transcript_id : XM_994159.2

name	Car1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227230 GeneID:12346 MGI:88268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 1 transcript_id : NM_009799.3

name	LOC100041785 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250628 GeneID:100041785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 180 ESTs, 1 Protein product : similar to cytochrome c oxidase, subunit VIc transcript_id : XM_001477158.1

name	Car3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131196 GeneID:12350 MGI:88270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 3 transcript_id : NM_007606.3

name	Car2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981656 GeneID:12349 MGI:88269
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 2 transcript_id : NM_009801.3

name	LOC100039985 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250607 GeneID:100039985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039985 transcript_id : XM_001473894.1

name	LOC751864 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:141802305 GeneID:751864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SIRP beta 1 like 2 transcript_id : NM_001076679.2

name	Sirpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41282034 GeneID:320832 MGI:2444824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-regulatory protein beta 1 transcript_id : NM_198405.1

name	Sirpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50872162 GeneID:320832 MGI:2444824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-regulatory protein beta 1 transcript_id : NM_001002898.1

name	Sirpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373246 GeneID:320832 MGI:2444824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-regulatory protein beta 1 transcript_id : NM_178792.3

name	LOC668101 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94369231 GeneID:668101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 14 Proteins product : similar to SIRP beta 1 transcript_id : XM_994308.1

name	LOC100041679 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250625 GeneID:100041679
definition	codon_start : 1 product : similar to LRRGT00008 protein_id : XP_001477038.1

name	0710005M24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519977 GeneID:76897 MGI:1924147
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC76897 protein_id : NP_848746.1

name	EG622229 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82800429 GeneID:622229 MGI:3648364
definition	codon_start : 1 product : similar to Solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 protein_id : XP_891737.1

name	Slc7a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18252792 CCDS:CCDS17246.1 GeneID:140918 MGI:2156159
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0015171 - amino acid transporter activity [Evidence IDA] GO_process : GO:0006865 - amino acid transport [Evidence IDA] codon_start : 1 note : Asc-2,asc-type amino acid transporter 2 product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 protein_id : NP_543128.1

name	Lrrcc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794168 GeneID:71710 MGI:1918960
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : leucine rich repeat and coiled-coil domain containing 1 protein_id : NP_083191.1

name	E2f5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982405 GeneID:13559 MGI:105091
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005635 - nuclear envelope [Evidence TAS]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence TAS]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : E2F transcription factor 5 protein_id : NP_031918.2

name	1810022K09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250627 GeneID:69126 MGI:1916376
definition	codon_start : 1 product : hypothetical protein LOC69126 protein_id : XP_001477140.1

name	Car13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13374567 CCDS:CCDS17247.1 GeneID:71934 MGI:1931322
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : carbonic anhydrase 13 protein_id : NP_078771.1

name	EG545507 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250606 GeneID:545507 MGI:3645250
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999253.2

name	Car1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116063531 CCDS:CCDS17248.1 GeneID:12346 MGI:88268
definition	GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 note : CA I product : carbonic anhydrase 1 protein_id : NP_033929.2

name	LOC100041785 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250629 GeneID:100041785
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477208.1

name	Car3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982861 CCDS:CCDS17250.1 GeneID:12350 MGI:88270
definition	GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016151 - nickel ion binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 product : carbonic anhydrase 3 protein_id : NP_031632.2

name	Car2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981657 CCDS:CCDS17251.1 GeneID:12349 MGI:88269
definition	EC_number : 4.2.1.1 GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0015670 - carbon dioxide transport [Evidence IMP]; GO:0002009 - morphogenesis of an epithelium [Evidence IMP]; GO:0006730 - one-carbon compound metabolism [Evidence IEA]; GO:0046903 - secretion [Evidence IMP] codon_start : 1 exception : mismatches in translation note : CA II product : carbonic anhydrase 2 protein_id : NP_033931.3

name	LOC100039985 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250608 GeneID:100039985
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473944.1

name	LOC751864 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:115511059 GeneID:751864
definition	codon_start : 1 product : SIRP beta 1 like 2 protein_id : NP_001070147.1

name	Sirpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41282035 GeneID:320832 MGI:2444824
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003823 - antigen binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IDA]; GO:0050766 - positive regulation of phagocytosis [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2; SIRP beta 1; SIRP-beta B; SIRP beta 1 cell surface protein product : SIRP beta 1 isoform 2 protein_id : NP_940797.1

name	Sirpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50872163 CCDS:CCDS17252.1 GeneID:320832 MGI:2444824
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003823 - antigen binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IDA]; GO:0050766 - positive regulation of phagocytosis [Evidence IDA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; SIRP beta 1; SIRP-beta B; SIRP beta 1 cell surface protein product : SIRP beta 1 isoform 3 protein_id : NP_001002898.1

name	Sirpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520271 GeneID:320832 MGI:2444824
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003823 - antigen binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IDA]; GO:0050766 - positive regulation of phagocytosis [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 1 is encoded by transcript variant 1; SIRP beta 1; SIRP-beta B; SIRP beta 1 cell surface protein product : SIRP beta 1 isoform 1 protein_id : NP_848907.1

name	LOC668101 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94369232 GeneID:668101
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999402.1

name	LOC100039882 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039882
definition	number : 1 pseudo : _no_value

name	LOC668062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668062
definition	number : 2 pseudo : _no_value

name	LOC668062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668062
definition	number : 1 pseudo : _no_value

name	LOC668068 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668068
definition	number : 2 pseudo : _no_value

name	LOC668068 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668068
definition	number : 1 pseudo : _no_value

name	LOC100039929 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039929
definition	number : 1 pseudo : _no_value

name	EG634323 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634323
definition	number : 1 pseudo : _no_value

name	LOC100041667 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250623 GeneID:100041667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 273 ESTs, 15 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_033002.1

clone name	MSMg01-051E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379G24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-383J18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-124D20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-402D03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-398N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065M01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-378M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-501H07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-236J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145L19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-330A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-330A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-456O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405A15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-194F24
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-206H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340J06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-468L21.T7 (MSMg01no468_l21.b1)	MSMg01-468L21.TJ (MSMg01no468_l21.g1)
ACC	AG552143	AG552144
length	768	789
length of high quality (start - end)	450 (52 - 501)	427 (77 - 503)
definition	CHROMAT_FILE: MSMg01no468_l21.b1 PHD_FILE: MSMg01no468_l21.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:45:04 2005	CHROMAT_FILE: MSMg01no468_l21.g1 PHD_FILE: MSMg01no468_l21.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:45:04 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TACATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAGAACCC GCGGAATTCTTTAAAAATTGCACATTTTTTTCTCATCACAGGGAGACCAG CATACATAAATAAAGGCATTGCACAAATACTTAAGGATTTAACAGGAGTT CAGTGACCAAAAACGGGGAACATTACTATGTCTGCAAGATCACGTCACGA AGTATAAAAGCAAACTATTGAGAAAAACGCCTCCATATGGCAGTGGGCTA TAAATAATGTTCTGTAGCCCACTCATTCCAAACCAACAAATGGAAAGGCT TTACTTTAAAGGCAGATGCCGTAAAAGTTTTTTCCTCTTTGAGCGGCGCC GTTGTCCTGCTTTGCGGCCGCGCAGGGCGGGGAAAGTGCGGCAGGCGGTT AGAGTCCTCGCCCCGCCCCTTGCTCACTCCCGGCTCCCGCTTTTGGAGGC GTGAGCAAGCTGGGACCCAGCGCTGGGCGCCGGTTAACACCCACTCCCCG TCGCGGGTACCATGTATGCGGCGGTGTGTAGCGAAATCTAACGGGAGGAT GGCTAAAGTACCTGCTGTTATTGGCGTTACTTGGTCAAAGTCCTGCACAG GTACTTGTTCTCACACCGGTTGGATCTCTATTTGTTTGTTTTCTTATATC CTCCTTCTTCTCAAGTTCTTCTTTTCTTTATTTCCTATGATTCTTTTTTT ATCTTCTCTTTTCTCCTCTCCAATCCTTTCTTTCTTTTCTCTTCTTCTTA TCTACTTATGCTTTTTAT	NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXCTACAGCTGATAAACAACTTCAGC AAAATGGCCAGATAGAAAATTAACACAAACTAATCAGTAGCCTTCCTCTA CACAAAGGATAAACTGGTTGAGAAAGAAATTAAGGAAATAAAACATTTCA CAATCGCCATAAACACTATAAAGTATCTTTGTGTGACTCTAACCAAACCA GTGAAATATCTGTATGACAAGAACTTAAGTCTCTGAAGAAAGAAGCCAAA GAAGACCTCAGACAATGGAAAGATTTCCCATGCTTGTGGATTGGCAGTAA TAATATGGTAAAAATGGCCATCTTGATGAAGGCAATATACAGATTGAATG CAAGCCCCATCAAAATTCCAACTCAATTCTTCATAGAGTTAGAAAAAGCA ATTCTCAAATTCATTTGAATAACAAAAACCCAGGAGTGTGAAAATTACTC TCAACAATAAAAGAACTTCTTGGAGAATCAGCATCCATGAACTTCAAGTG TTGTGAAAAAACTTGCTGGAATTGGCATAATGACAGGCCAGTAAAATTGT GGAAAGGGATTTGAAGATCCCCAATGACCCCGCCCACCTATAGGGCCTTA ATTTTTGACAAATATTCCGGGTAGATACCCCTCTCGGTAAAAAAAATGCA TTTTCTTCTAAAGGGGTGTTTTCTTTCTCGTACTCCTATGTAAAAAAAAG GAAAATTGTCCACTCTTTTTCCCCATATAGAATCAACGG
quality values	Open. Hide. 8 10 8 7 7 10 10 9 15 15 13 15 17 28 32 25 20 19 19 19 28 23 18 9 9 9 21 21 43 28 28 28 25 23 27 25 14 9 9 9 9 9 7 8 7 7 6 6 8 10 12 23 20 30 30 31 31 41 44 59 59 59 59 27 22 9 9 6 6 6 6 6 8 11 12 30 32 37 47 47 48 47 47 53 53 53 50 38 42 42 42 42 53 47 47 47 47 47 47 47 43 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 54 46 44 30 24 17 17 20 22 36 32 42 43 42 42 57 59 51 51 50 50 50 50 68 68 68 50 50 50 50 50 50 68 57 57 57 50 50 50 50 50 68 68 68 68 68 59 59 57 54 50 50 50 51 68 57 59 59 59 59 59 59 57 57 57 57 59 59 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 57 57 57 57 57 57 59 59 57 57 57 59 59 68 68 68 68 57 68 59 59 59 59 57 54 54 54 54 54 59 57 57 48 57 50 53 57 57 57 50 57 57 57 57 57 59 59 59 59 59 59 50 50 50 50 47 47 41 21 18 9 9 9 17 27 36 59 59 59 59 59 59 59 59 59 57 57 50 47 47 47 48 48 48 48 57 57 57 57 59 59 59 59 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 59 59 59 59 57 57 57 57 50 53 59 59 59 59 47 39 23 21 11 11 10 9 9 9 9 9 10 30 30 59 59 59 59 59 53 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 39 35 35 41 47 59 59 48 43 43 47 59 59 59 44 44 35 39 43 57 54 57 57 57 48 48 48 48 59 44 44 43 46 46 57 44 57 47 47 47 44 57 43 47 35 37 37 47 47 37 43 43 59 59 59 59 54 54 54 59 57 57 57 59 57 48 48 43 43 43 59 59 57 48 48 59 59 57 48 48 48 48 48 43 43 43 48 43 39 39 48 48 48 41 41 34 30 19 19 19 18 18 30 30 28 34 34 37 24 21 14 17 17 28 26 31 35 31 32 20 28 20 32 32 43 43 43 43 47 46 48 48 27 22 8 8 8 15 13 14 11 19 11 16 16 18 19 19 12 11 11 11 11 13 10 11 10 8 8 8 8 11 12 16 11 11 11 18 13 14 9 10 8 8 8 8 10 10 10 10 10 6 6 6 6 6 6 10 8 6 6 6 6 8 8 8 8 8 10 10 8 7 8 8 8 8 8 8 8 8 10 13 10 10 10 10 13 11 9 9 9 9 9 8 8 8 8 10 10 6 6 8 6 6 6 6 8 9 9 9 10 13 14 14 11 10 8 10 7 6 8 8 10 9 10 10 10 11 7 7 10 10 13 10 11 8 13 10 10 10 9 9 10 8 10 10 8 8 8 8 8 8 8 8 11 13 11 10 10 9 9 8 10 8 8 8 8 6 6 6 6 10 10 8 8 8 11 15 13 9 9 10 10 7 6 7 8 8 11 8 10 10 10 10 10 19 10 10 10 10 11 13 13 18 10 10 10 19 17 20 14 14 10 10 10 12 12 17 26 10 10 6 6 8 8 9 10 10 10 10 10 10 14 10 11 12 13 10 8 8 8 10 8 8 8 10 11 8 8 8 8 8 8 8 11 10 10 10 10 10 15 10 10 9 9 10 10 11 8 10 10 10 9	Open. Hide. 0 0 3 7 7 11 10 10 9 9 9 15 15 8 8 8 17 14 31 31 39 39 39 39 39 37 31 31 37 37 33 34 23 17 9 9 9 14 9 9 9 14 15 17 23 25 28 39 37 37 47 47 47 47 47 53 50 50 50 59 41 31 13 15 8 8 8 8 8 9 9 21 21 30 33 33 48 33 36 36 36 36 38 42 42 43 43 43 57 57 53 53 53 47 47 47 42 42 42 51 54 68 68 68 68 68 48 50 48 50 50 53 54 68 68 68 48 50 41 41 41 41 54 47 47 47 47 47 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 57 68 68 68 68 68 68 68 68 48 48 46 46 46 48 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 50 50 50 50 50 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 68 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 57 57 44 43 41 41 38 32 23 27 21 38 38 57 57 57 68 68 68 57 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 59 57 68 68 57 57 57 44 43 57 57 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 59 57 54 54 54 57 57 68 68 68 68 68 68 68 68 68 54 54 54 54 57 57 57 57 57 57 57 57 57 47 47 42 42 42 47 57 57 48 48 59 59 59 48 48 41 41 41 41 59 59 41 32 32 43 59 59 59 59 37 41 36 36 36 32 36 35 37 37 37 31 31 39 39 37 41 37 37 37 43 39 37 37 41 37 32 41 41 41 41 59 41 38 34 37 37 37 34 28 18 18 12 12 12 30 25 29 29 29 26 32 32 33 24 23 15 15 15 24 19 25 15 9 8 8 8 13 10 20 22 20 24 28 25 28 28 24 20 15 15 15 14 15 13 13 24 14 18 17 15 15 10 9 8 8 8 8 8 8 8 8 10 15 10 9 10 11 9 10 14 11 15 19 18 8 8 11 8 8 8 8 12 9 9 8 8 8 8 12 11 10 11 10 10 9 9 9 9 9 12 11 10 9 9 8 8 8 9 8 9 8 8 8 8 8 9 11 10 11 8 8 7 8 8 8 8 10 10 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 14 9 9 9 9 9 9 10 10 8 8 8 8 8 8 8 8 8 11 11 10 11 11 13 25 23 8 8 8 6 6 8 8 8 8 10 10 10 10 10 12 6 6 6 6 6 7 10 9 11 12 9 9 9 13 9 7 8 6 6 8 7 11 10 12 8 8 8 8 8 8 9 15 15 6 6 6 8 9 9 10 12 16 16 11 9 9 9 9 9 10 8 10 10 10 8 8 8 7 6 6 6 6 10 13 8 8 10 14 10 10 12 10 18 19 11 11 21 21 7 8 7 6 8 8 8 6 6 6 10 8 8 8 8 8 10 12 10 10 14 15 13 10 12 11 9 8 8 8 8 8 8 8 8 9 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no468_l21.b1 MSMg01no468_l21.b1 CHROMAT_FILE:
MSMg01no468_l21.b1 PHD_FILE: MSMg01no468_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:04 2005
         (450 letters)



>mm_chr3_14533273_14534123
          Length = 851

 Score =  793 bits (410), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 15/456 (3%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattctttaaaaattgc---acatttttttctcatcacagggagaccagcatacataaa 59
           ||||||||||||||  ||   |||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctttaaaaa--gctgaacatttttttctcatcacagggagaccagcatacataaa 260

                                                                       
Query: 60  taaaggcattgcacaaatacttaaggatttaacaggagttcagtgaccaaaaacggggaa 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaggcattgcacaaatacttaaggatttaacaggagttcagtgaccaaaaacggggaa 320

                                                                       
Query: 120 cattactatgtctgcaagatcacgtcacgaagtataaaagcaaactattgagaaaaacgc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattactatgtctgcaagatcacgtcacgaagtataaaagcaaactattgagaaaaacgc 380

                                                                       
Query: 180 ctccatatggcagtgggctataaataatgttctgtagcccactcattccaaaccaacaaa 239
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ctccatatggcagtgggctataaataatgttcagtagcccactcattccaaaccaacaaa 440

                                                                       
Query: 240 tggaaaggctttactttaaaggcagatgccgtaaaagttttttc-----ctctttgagcg 294
           ||||||||||||||||||||||||||||||||||||||     |     |||||||||||
Sbjct: 441 tggaaaggctttactttaaaggcagatgccgtaaaagt-----caagccctctttgagcg 495

                                                                       
Query: 295 gcgccgttgtcctgctttgcggccgcgcagggcggggaaagtgcggcaggcggttagagt 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gcgccgttgtcctgctttgcggccgcgcagggcggggaaagtgcggcaggcggttagagt 555

                                                                       
Query: 355 cctcgccccgccccttgctcactcccggctcccgcttttggaggcgtgagcaagctggga 414
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 556 cctcgccccgccccttgctcactccccgctcccgcttttggaggcgtgagcaagctggga 615

                                               
Query: 415 cccagcgctgggcgccggttaacacccactccccgt 450
           ||||||||||||||||||||||||||||||||||||
Sbjct: 616 cccagcgctgggcgccggttaacacccactccccgt 651


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space:   370040
Effective search space used:   370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information