MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-471I01
Chromosome	3 (Build37)
Map Location	129,918,599 - 129,919,169
singlet/doublet	singlet
Overlap gene	Col25a1
Upstream gene	Pitx2, Enpep, LOC100043415, LOC435755, LOC668840, Elovl6, LOC100043758, Egf, Gm421, Rrh, Nola1, Cfi, Pla2g12a, Casp6, Ccdc109b, Sec24b, EG668844, EG668845
Downstream gene	Agxt2l1, 2310008M10Rik, Rpl34, LOC546811, LOC545568, Lef1, 6720418B01Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pitx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Enpep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13809 MGI:106645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043415 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC435755 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 18 Proteins

name	LOC668840 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668840
definition	note : 60S ribosomal protein L7a pseudogene pseudo : _no_value

name	Elovl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170439 MGI:2156528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Egf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13645 MGI:95290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm421 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242235 MGI:2685267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Rrh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20132 MGI:1097709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nola1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68147 MGI:1930948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cfi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12630 MGI:105937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g12a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66350 MGI:1913600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Casp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12368 MGI:1312921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc109b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66815 MGI:1914065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec24b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99683 MGI:2139764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668844 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668844 MGI:3645563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1508 ESTs, 8 Proteins

name	EG668845 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668845 MGI:3645564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Col25a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77018 MGI:1924268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Agxt2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71760 MGI:1919010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310008M10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66357 MGI:1913607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68436 MGI:1915686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546811 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC545568 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 798 ESTs, 19 Proteins pseudo : _no_value

name	Lef1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16842 MGI:96770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6720418B01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77892 MGI:1925142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Pitx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948273 GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 2 transcript_id : NM_011098.3

name	Pitx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948276 GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 2 transcript_id : NM_001042504.1

name	Pitx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948274 GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 2 transcript_id : NM_001042502.1

name	Enpep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286800 GeneID:13809 MGI:106645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamyl aminopeptidase transcript_id : NM_007934.3

name	LOC100043415 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251396 GeneID:100043415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001480111.1

name	Elovl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598889 GeneID:170439 MGI:2156528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELOVL family member 6, elongation of long chain fatty acids (yeast) transcript_id : NM_130450.2

name	LOC100043758 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251482 GeneID:100043758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043758 transcript_id : XM_001481055.1

name	Egf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375391 GeneID:13645 MGI:95290
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor transcript_id : NM_010113.2

name	Gm421 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251399 GeneID:242235 MGI:2685267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : gene model 421, (NCBI) transcript_id : XM_143529.6

name	Rrh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114842394 GeneID:20132 MGI:1097709
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinal pigment epithelium derived rhodopsin homolog transcript_id : NM_009102.3

name	Nola1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366408 GeneID:68147 MGI:1930948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) transcript_id : NM_026578.2

name	Cfi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347405 GeneID:12630 MGI:105937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component factor i transcript_id : NM_007686.2

name	Pla2g12a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475672 GeneID:66350 MGI:1913600
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group XIIA transcript_id : NM_023196.2

name	Pla2g12a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34556196 GeneID:66350 MGI:1913600
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group XIIA transcript_id : NM_183423.1

name	Casp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981864 GeneID:12368 MGI:1312921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 6 transcript_id : NM_009811.2

name	Ccdc109b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982669 GeneID:66815 MGI:1914065
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 109B transcript_id : NM_025779.2

name	Sec24b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130985 GeneID:99683 MGI:2139764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC24 related gene family, member B (S. cerevisiae) transcript_id : NM_207209.2

name	EG668844 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251484 GeneID:668844 MGI:3645563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1508 ESTs, 8 Proteins product : predicted gene, EG668844 transcript_id : XM_001003945.2

name	Col25a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46397404 GeneID:77018 MGI:1924268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XXV, alpha 1 transcript_id : NM_198711.2

name	Col25a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46397405 GeneID:77018 MGI:1924268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XXV, alpha 1 transcript_id : NM_029838.3

name	Agxt2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802115 GeneID:71760 MGI:1919010
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alanine-glyoxylate aminotransferase 2-like 1 transcript_id : NM_027907.2

name	2310008M10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982672 GeneID:66357 MGI:1913607
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310008M10 gene transcript_id : NM_025509.2

name	Rpl34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55742884 GeneID:68436 MGI:1915686
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L34 transcript_id : NM_026724.1

name	Rpl34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131103 GeneID:68436 MGI:1915686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L34 transcript_id : NM_001005859.2

name	Lef1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130133 GeneID:16842 MGI:96770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lymphoid enhancer binding factor 1 transcript_id : NM_010703.3

name	6720418B01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369865 GeneID:77892 MGI:1925142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : RIKEN cDNA 6720418B01 gene transcript_id : XM_001005301.1

name	Pitx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30841039 CCDS:CCDS17830.1 GeneID:18741 MGI:109340
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0002074 - extraocular skeletal muscle development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI] [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : paired-like homeodomain transcription factor 2 isoform b protein_id : NP_035228.2

name	Pitx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109948277 GeneID:18741 MGI:109340
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0002074 - extraocular skeletal muscle development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI] [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : paired-like homeodomain transcription factor 2 isoform a protein_id : NP_001035969.1

name	Pitx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109948275 GeneID:18741 MGI:109340
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0002074 - extraocular skeletal muscle development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI] [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IDA] codon_start : 1 note : isodorm c is encoded by transcript variant 3 product : paired-like homeodomain transcription factor 2 isodorm c protein_id : NP_001035967.1

name	Enpep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679653 CCDS:CCDS17831.1 GeneID:13809 MGI:106645
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005903 - brush border [Evidence IDA]; GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004230 - glutamyl aminopeptidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004179 - membrane alanyl aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0016477 - cell migration [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : aminopeptidase-A product : glutamyl aminopeptidase protein_id : NP_031960.1

name	LOC100043415 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251397 GeneID:100043415
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480161.1

name	Elovl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18496985 GeneID:170439 MGI:2156528
definition	GO_component : GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IDA] GO_function : GO:0016747 - transferase activity, transferring groups other than amino-acyl groups [Evidence IDA] GO_process : GO:0030497 - fatty acid elongation [Evidence IDA] codon_start : 1 note : long chain fatty acyl elongase; FEN1/Elo2, SUR4/Elo3-like product : ELOVL family member 6, elongation of long chain fatty acids protein_id : NP_569717.1

name	LOC100043758 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251483 GeneID:100043758
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481105.1

name	Egf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753732 CCDS:CCDS17833.1 GeneID:13645 MGI:95290
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008083 - growth factor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0000186 - activation of MAPKK activity [Evidence IDA]; GO:0048754 - branching morphogenesis of a tube [Evidence IDA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS] [Evidence IGI] [Evidence IDA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA] codon_start : 1 exception : mismatches in translation product : epidermal growth factor protein_id : NP_034243.1

name	Gm421 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251400 GeneID:242235 MGI:2685267
definition	codon_start : 1 product : similar to FLJ44691 protein protein_id : XP_143529.6

name	Rrh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677821 GeneID:20132 MGI:1097709
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0018298 - protein-chromophore linkage [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : peropsin product : retinal pigment epithelium derived rhodopsin homolog protein_id : NP_033128.1

name	Nola1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384710 GeneID:68147 MGI:1930948
definition	GO_component : GO:0001651 - dense fibrillar component [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005732 - small nucleolar ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0019843 - rRNA binding [Evidence IEA]; GO:0030515 - snoRNA binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 note : H/ACA small nucleolar RNPs product : nucleolar protein family A, member 1 protein_id : NP_080854.1

name	Cfi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347406 CCDS:CCDS17835.1 GeneID:12630 MGI:105937
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003818 - complement factor I activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : complement component factor i protein_id : NP_031712.2

name	Pla2g12a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963565 CCDS:CCDS17836.1 GeneID:66350 MGI:1913600
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005576 - extracellular region [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IDA] GO_process : GO:0016042 - lipid catabolism [Evidence IC]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; group XIIA secreted phospholipase A2 product : group XII-1 phospholipase A2 isoform 1 protein_id : NP_075685.1

name	Pla2g12a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34556197 CCDS:CCDS17837.1 GeneID:66350 MGI:1913600
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005576 - extracellular region [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IDA] GO_process : GO:0016042 - lipid catabolism [Evidence IC]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; group XIIA secreted phospholipase A2 product : group XII-1 phospholipase A2 isoform 2 protein_id : NP_904359.1

name	Casp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981865 CCDS:CCDS17838.1 GeneID:12368 MGI:1312921
definition	GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : caspase 6 protein_id : NP_033941.2

name	Ccdc109b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982670 CCDS:CCDS17839.1 GeneID:66815 MGI:1914065
definition	codon_start : 1 product : coiled-coil domain containing 109B protein_id : NP_080055.2

name	Sec24b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402179 CCDS:CCDS17840.1 GeneID:99683 MGI:2139764
definition	GO_component : GO:0030127 - COPII vesicle coat [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 product : SEC24 related gene family, member B protein_id : NP_997092.1

name	EG668844 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251485 GeneID:668844 MGI:3645563
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003945.2

name	Col25a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38570079 GeneID:77018 MGI:1924268
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005576 - extracellular region [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; collagen, type XXV, alpha 1; collagen-like Alzheimer amyloid plaque component product : collagen, type XXV, alpha 1 isoform 2 protein_id : NP_942004.1

name	Col25a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38570077 GeneID:77018 MGI:1924268
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005576 - extracellular region [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; collagen, type XXV, alpha 1; collagen-like Alzheimer amyloid plaque component product : collagen, type XXV, alpha 1 isoform 1 protein_id : NP_084114.2

name	Agxt2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313030 GeneID:71760 MGI:1919010
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : alanine-glyoxylate aminotransferase 2-like 1 protein_id : NP_082183.1

name	2310008M10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384930 GeneID:66357 MGI:1913607
definition	GO_component : GO:0008250 - oligosaccharyl transferase complex [Evidence ISS] GO_function : GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity [Evidence ISS] GO_process : GO:0018279 - protein amino acid N-linked glycosylation via asparagine [Evidence ISS] codon_start : 1 product : DC2 protein protein_id : NP_079785.1

name	Rpl34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55741555 CCDS:CCDS17841.1 GeneID:68436 MGI:1915686
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : 60S ribosomal protein L34 product : ribosomal protein L34 protein_id : NP_001005859.1

name	Rpl34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55742885 CCDS:CCDS17841.1 GeneID:68436 MGI:1915686
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : 60S ribosomal protein L34 product : ribosomal protein L34 protein_id : NP_081000.1

name	Lef1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27735019 CCDS:CCDS17842.1 GeneID:16842 MGI:96770
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IPI] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0008301 - DNA bending activity [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence IGI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0048468 - cell development [Evidence IGI]; GO:0030879 - mammary gland development [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IMP] [Evidence IEA] codon_start : 1 note : lymphoid enhancer factor 1 product : lymphoid enhancer binding factor 1 protein_id : NP_034833.2

name	6720418B01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369866 GeneID:77892 MGI:1925142
definition	codon_start : 1 product : hypothetical protein LOC77892 protein_id : XP_001005301.1

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 1 pseudo : _no_value

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 2 pseudo : _no_value

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 3 pseudo : _no_value

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 4 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 5 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 4 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 3 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 2 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 1 pseudo : _no_value

name	LOC435755 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251398 GeneID:435755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 18 Proteins product : POU domain, class 5, transcription factor 1-like transcript_id : XR_034544.1

name	LOC545568 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251403 GeneID:545568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 798 ESTs, 19 Proteins product : similar to Eno1 protein pseudo : _no_value transcript_id : XR_034564.1

name	(CDS detail)
type	unsure
link
xref
definition	note : single clone coverage

clone name	MSMg01-378K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-471I01.T7 (MSMg01no471_i01.b1)	MSMg01-471I01.TJ (MSMg01no471_i01.g1)
ACC	AG554255	AG554256
length	886	740
length of high quality (start - end)	---	566 (79 - 644)
definition	CHROMAT_FILE: MSMg01no471_i01.b1 PHD_FILE: MSMg01no471_i01.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:48:46 2005	CHROMAT_FILE: MSMg01no471_i01.g1 PHD_FILE: MSMg01no471_i01.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:48:46 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CTGTCCCCCCAACCCCTCCTCCCTATTATCCATTTTTTCCACAACGCAAG NAAAAGAAAAATTTCCCCACCAATTCTCCGCCAACAAGCAAAGAGCGAAA TTTCCCTCCCTCTCCCCTCCCCCCACACCACAACAATAGCACAACAACCA AAAACAACAAACACTATACTCTTAGAACGACTAAACATAAGTCTACAAAC AGTCCCCCTTTTCTACCTCCTCCTTAATTTTTTCTCATATCTATCTCACC CGCCCTATCACAACCCTCTCCCTCTCGTTTCATCCGCCCCCGTATACTAC ATACTTAACCCCCGCTCCCCTCACCCTATAATTACACACAACCTTTTCTT ATCCCCCCCACACCCTCATCCCCCAACTACTTTCAATTTTTTATTATTCC CATCTTTATCCTCTTCTCCCCATTTTTTAATATATCTTACACCCTCCCCT CCATTCCCCCCTCACTAAATTCCCACACATCTACCCACCACACCAACTAA ACCTACCCTCTTTTAATTATATTTATAATATCCCCACCAAACATCTATAT CTCCTATCTTCACTTATTACATATCAAATATAAACCCTACTTTCTCCCAC TTACCTATCTTTCACCCACTATTTTCTATACACATCATCTACATAAAAAA AACAATTCCCCACTCACTACAATTATAATACACATCTAAAATATATCATT TATATCACCATCTCTCAAATTTACTCCATTTCCCACACCCCCAACATTCT ATTACACCCCTTCTTCTACTTCCTCCTCTACTAACCACTTCCTTATATAT CCCCCCCTCCCTTATATTCTCTTTTCTTTTTATTATTCTTCTTCACTTAA AATCCTACACCCATAATTACAACCCCTAACCACAAG	TTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXCCACTTCCTGACCCACTCTGAT CAGGTGCAAAGTAGAAGAGGTGAAAAATCCATTCTTATGTTTAACTGAGC TCCTTATTCAAAGGAACACAAACATTTGTGAGGATGTAGTCTTTAAAATG CTTGTCAAACTCTAAAGCTTTTAAAACATCTATGAGTCTGTGAGTAGCAG ACAAAAGCAGGCAGGAGGAAAATGTTTTCACGAGTTAATTCCTTAATTTA GAAAAAGCCATGTGGCAAAATGGAGAGAGAGAACAATGGGCCAAATTTTA GTCAGTAGGTATGGAGGGAAAGAAGTAAAGATTTTGAAACTTAGGAAGAA AATACTTCATATACAAACAACTAATATTGCTTTCAATAATTCTTATTCTT CTCTTCCTGTGGAAAGGCTTGTCATGGTTAAACTGTCTGGCCAGTTAGTT GATTGGTACTAAACGGTCTGATTTTAAGGGAGGGGTGTTTATAGAATGGA TGGCAGTTATACAACTCATGGTAAAGCAAGATCATGGGGAGAGCGAGGTG ATGTCTGATATCAACATTGATTGCATGAGAGTTGTTTACAGAAGATAAAA TGGTTTTATCCTTTCTCCCTTAAGTTGCCTTGGTCATTGTATGTTCTCAC AGCAATGGGAAAGGAAACTAAGCCATGCCTGGTGGCCAAA
quality values	Open. Hide. 8 8 7 7 8 9 11 10 11 11 12 12 12 18 10 13 8 8 8 8 8 8 10 8 8 8 6 6 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 6 6 8 8 8 8 3 0 3 12 7 9 9 9 13 12 8 8 8 8 8 8 10 9 9 9 9 15 13 13 13 13 11 8 8 8 8 8 8 10 10 8 8 8 6 6 8 8 8 8 8 8 8 8 9 10 9 9 9 11 17 11 13 11 11 11 8 8 8 8 8 8 10 10 10 12 12 12 15 11 10 10 8 8 8 9 9 9 10 10 12 10 10 9 9 9 9 9 9 10 10 10 15 12 11 11 11 13 11 11 11 8 6 6 6 8 8 10 9 11 8 12 7 6 8 8 10 8 8 8 8 8 10 8 8 6 6 8 8 8 6 6 6 6 6 8 8 9 9 9 9 10 13 11 11 8 8 8 6 6 8 8 8 8 13 15 9 9 8 8 8 8 8 8 8 8 8 10 12 10 10 9 10 10 10 10 10 19 12 10 9 9 9 9 9 8 10 10 9 9 8 8 8 8 8 8 8 8 8 10 8 8 8 10 10 11 11 8 8 8 8 8 8 8 6 6 8 8 8 8 8 10 10 10 10 12 8 8 10 8 10 8 13 14 17 16 11 10 9 7 7 7 8 8 10 8 8 6 6 6 8 8 11 12 12 12 15 15 16 12 16 15 11 9 9 10 8 8 8 8 10 10 15 8 8 6 6 8 8 8 8 8 8 8 8 8 8 6 6 8 12 8 8 10 11 11 10 10 10 10 16 15 21 16 10 10 10 10 9 9 13 12 12 8 8 8 8 15 13 11 9 9 8 8 8 8 8 8 9 13 11 10 10 12 12 11 8 8 8 8 8 8 8 8 8 8 6 6 10 11 11 9 14 9 9 9 10 13 15 10 10 8 8 8 8 8 8 9 10 8 10 11 8 8 8 8 8 10 11 11 8 8 6 6 6 6 8 8 12 12 13 8 8 8 10 10 10 11 11 10 10 10 10 12 15 15 11 11 11 10 13 9 10 9 12 11 11 10 8 8 8 10 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 15 8 10 9 11 8 8 8 8 8 9 9 10 10 10 10 10 10 10 8 8 10 10 8 7 7 8 10 10 11 11 14 15 11 8 8 8 6 6 8 10 8 8 10 8 8 10 10 11 11 8 8 8 8 8 8 8 8 8 8 8 8 13 13 8 8 8 10 8 10 10 10 10 10 9 9 10 8 8 8 8 8 8 8 8 10 9 11 11 11 11 11 11 12 11 8 8 10 11 10 12 10 11 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 6 6 6 8 10 15 15 13 11 8 8 8 10 10 11 9 6 8 8 11 11 11 11 11 11 8 8 8 8 8 12 16 13 13 6 6 6 6 8 8 8 8 9 14 10 10 8 10 8 8 8 8 8 8 10 10 8 8 8 8 8 8 10 10 10 6 8 6 9 8 8 10 10 11 13 14 12 12 7 6 8 8 18 11 11 8 8 8 8 10 9 8 8 10 10 8 10 8 8 6 6 8 6 8 8 10 11 11 10 10 10 10 9 10 11 10 15 10 10 10 15 15 25 19 17 8 6 8 8 8 10 6 7 8 8 9 6 6 6 8 8 8 8 8 8 8 8 15 8 10 6 6 6 8 9 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 14 15 13 9 8 8 8 9 9 13 15 16 10 10 9 8 8 10 9 7 8 6 6 8 10 10 8 8 8 8 11 10 11 11 12 12 11 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 11 10 9 10 9 9 9 11 11 11 11 11 10 10 10 10 11 10 11 10 10 8 8 12 9 9	Open. Hide. 7 7 6 6 6 7 9 8 8 10 9 8 8 8 9 9 17 14 24 24 35 35 39 37 37 37 39 50 50 50 42 37 21 21 9 9 6 6 6 8 8 8 9 11 21 21 41 50 50 53 47 47 50 47 47 50 50 57 53 53 35 23 20 9 10 19 22 26 36 47 57 57 42 41 41 41 48 48 54 54 48 50 53 59 59 59 54 54 54 47 47 48 47 51 50 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 59 59 43 43 46 57 57 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 44 44 44 54 52 57 57 57 57 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 57 57 59 45 52 57 59 59 68 68 68 57 57 57 57 57 59 59 57 57 57 59 57 57 57 57 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 68 68 68 62 62 52 43 43 39 35 44 44 62 62 62 52 52 52 62 52 62 52 62 62 68 68 68 62 62 68 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 52 52 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 68 68 68 68 44 44 31 43 39 44 44 62 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 44 44 44 62 39 44 43 52 52 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 59 59 59 68 68 68 59 59 59 52 52 52 59 59 59 59 68 59 59 59 59 59 57 52 52 57 57 57 52 52 52 57 59 59 57 57 57 57 57 57 57 57 59 59 59 52 59 59 59 59 59 52 52 52 52 52 52 52 54 54 54 57 44 57 52 52 52 57 52 54 54 57 59 68 68 57 57 57 57 57 48 43 43 43 43 43 57 44 47 47 44 47 48 48 59 57 59 44 46 43 43 42 44 42 37 37 32 32 40 48 43 59 43 40 40 44 44 44 40 41 30 30 37 44 43 57 57 39 42 37 43 36 43 37 43 36 43 36 33 33 36 43 43 39 42 35 35 28 37 28 30 30 37 37 43 43 43 48 43 39 39 37 39 34 34 25 25 25 32 27 31 35 37 39 39 34 28 25 18 28 12 12 11 15 15 27 27 20 15 13 13 13 18 33 27 35 31 25 28 32 32 37 30 30 24 31 31 35 28 30 21 17 11 11 14 12 16 18 18 21 12 12 11 21 16 28 20 23 23 32 28 22 22 24 24 23 15 15 17 17 30 23 29 37 36 37 34 25 30 28 25 25 30 30 41 37 24 25 15 15 12 15 19 28 33 27 31 28 24 14 14 14 17 17 15 16 16 16

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no471_i01.g1 MSMg01no471_i01.g1 CHROMAT_FILE:
MSMg01no471_i01.g1 PHD_FILE: MSMg01no471_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:46 2005
         (566 letters)



>mm_chr3_129918399_129919369
          Length = 971

 Score =  965 bits (499), Expect = 0.0
 Identities = 551/571 (96%), Gaps = 5/571 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccacttcctgacccactctgatcaggtgcaaagtagaagaggtgaaaaatccattcttat 60
           ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 771 ccacttcatgactcactctgatcaagtgcaaagtagaagaggtgaaaaatccattcttat 712

                                                                       
Query: 61  gtttaactgagctccttattcaaaggaacacaaacatttgtgaggatgtagtctttaaaa 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 711 gtttaactgagctccttattcaaaggaacacaatcatttgtgaggatgtagtctttaaaa 652

                                                                       
Query: 121 tgcttgtcaaactctaaagcttttaaaacatctatgagtctgtgagtagcagacaaaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tgcttgtcaaactctaaagcttttaaaacatctatgagtctgtgagtagcagacaaaagc 592

                                                                       
Query: 181 aggcaggaggaaaatgttttcacgagttaattccttaatttagaaaaagccatgtggcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aggcaggaggaaaatgttttcacgagttaattccttaatttagaaaaagccatgtggcaa 532

                                                                       
Query: 241 aatggagagagagaacaatgggccaaattttagtcagtaggtatggagggaaagaagtaa 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aatgaagagagagaacaatgggccaaattttagtcagtaggtatggagggaaagaagtaa 472

                                                                       
Query: 301 agattttgaaacttaggaagaaaatacttcatatacaaacaactaatattgctttcaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agattttgaaacttaggaagaaaatacttcatatacaaacaactaatattgctttcaata 412

                                                                       
Query: 361 attcttattcttctcttcctgtggaaaggcttgtcatggttaaactgtctggccagttag 420
           ||||||||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||
Sbjct: 411 attcttattcttctcttcctgtggaaaggcttgtcttagttatgctgtctggccaattag 352

                                                                       
Query: 421 ttgattggt-----actaaacggtctgattttaagggaggggtgtttatagaatggatgg 475
           |||||||||     ||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 351 ttgattggtgtggtactaaactgtctgattttaagagaggggtgtttatagaatggatgg 292

                                                                       
Query: 476 cagttatacaactcatggtaaagcaagatcatggggagagcgaggtgatgtctgatatca 535
           |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 291 cagttatacaactcatggtaaagcaagatcatggggagagtgagatgatgtctgatatca 232

                                          
Query: 536 acattgattgcatgagagttgtttacagaag 566
           ||||||||||| |||||||||||||||||||
Sbjct: 231 acattgattgcttgagagttgtttacagaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 971
Length adjustment: 10
Effective length of query: 556
Effective length of database: 961
Effective search space:   534316
Effective search space used:   534316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information