CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAAAATCCGCGGAA
TTCCACAGAAATACGGCAGAAAGCTTGTAGGAGTCAGAGTGGGTAGAGGA
TACCAGGAGAGGATACCAGAAGAACACAGCCTACTGACTCAACTAAGCAG
GGATCCCGTGGGCTCGCAGAGACTGAAGTGGCAAGCATGGGGCCTGTAAA
GGTCTGCACCAGGTCCTCTGTGTATATGTTGTGTCTGTTAGCTTAGTGTT
TTTGTGGGACTCCCACCTGTGGAAGCAGGTGTGTGTCTGACTCTTTTGCC
TCATCTTGCGATTCTTTTCTTTATGCTGTCTTGCCTTGTCCAGCATCAGT
GTGAGGGCTTTTTGCGCTGTCTTATATTTTCTTTTGTCCTATTCCGTGGA
GACCTGCTCTTCTCTGAGGAGAAGTGGAGGGAGTGGGGAGTGGCTTTGGG
AGAGAGGGGAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNGNNNNNN
NNNNNNNGGGGGNGGGGGGTGGGGGTGGTGGTTGGTTTGGTGTTTGGTTT
TTTTTTTTTTTTTTTTNTTTGTTTGTGTTTTTTTGGTTGTTTTTTTGTGT
TTTTTTTTCTTGTGGGTTNGGTGTTTTTTTTTTTTTGGTTTTTGTTGGTG
TGTGGGTCCTCTTTCGC

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGCAGACAGAAGAAATGCTTGGCAAT
TTGTACTTTGGTTTAAGCCTGACATGTTCATCCTGGCATTTATTTTAAGC
TGATTTTTTTAGTTAGAAACCTATTACCAGGTCTCTCGTCAAAGAGTGAG
AAGACTGTGGACTAAGCCCAGCTACTGCTGATTGGAGTAAATACACTTAT
TGGAGTGAAAGTGCCTCCCATGGGGTTTTCTCCATATGTTCTTTCATGCT
ACACCCCAAGGACCATGTGATGATAGAGGGATCTGCAAGTCTTTGAGAAC
CTTACTATTTCGAATTTTACAGAATAAAGTGTGTTAACTTGTGGTCTGGA
TATTTTCACTCTGTTGACCTAGTCAGTGTGGGGAAAAAAATAAAACATGT
AAGACTTCATCAAAATTAGATCCCTGAGACATAATGTTTATTACTTATCT
AATCACATCTGATTTTATTAAACTTGCTTGCATGATATCTAATATTCCTT
TAATACTTTAAACATGTCCTCAAATAAACCAAGCATATAAAATATTGCAG
TGGTCACAACATCATTTTTGTGATCACAAGAATCACAAAAATTATGGGCC
TAAAGGCTATAGTGACAGGCTTGTCTGGTGACTAGGCCTATCTGCATGGG
TTCTAACACATATGTACATCCCATCATTATCTCTATTTATATACCTTTCC
TTAACTTTCATCTTATACCTTCCTCAGGNTGN

Query= MSMg01no471_i24.g1 MSMg01no471_i24.g1 CHROMAT_FILE:
MSMg01no471_i24.g1 PHD_FILE: MSMg01no471_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:51 2005
         (527 letters)



>mm_chr3_35270609_35271536
          Length = 928

 Score = 1013 bits (524), Expect = 0.0
 Identities = 527/528 (99%), Gaps = 1/528 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcagacagaagaaatgcttggcaatttgtactttggtttaagcctgacatgttcatcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tgcagacagaagaaatgcttggcaatttgtactttggtttaagcctgacatgttcatcct 669

                                                                       
Query: 61  ggcatttattttaagctga-tttttttagttagaaacctattaccaggtctctcgtcaaa 119
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ggcatttattttaagctgattttttttagttagaaacctattaccaggtctctcgtcaaa 609

                                                                       
Query: 120 gagtgagaagactgtggactaagcccagctactgctgattggagtaaatacacttattgg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gagtgagaagactgtggactaagcccagctactgctgattggagtaaatacacttattgg 549

                                                                       
Query: 180 agtgaaagtgcctcccatggggttttctccatatgttctttcatgctacaccccaaggac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 agtgaaagtgcctcccatggggttttctccatatgttctttcatgctacaccccaaggac 489

                                                                       
Query: 240 catgtgatgatagagggatctgcaagtctttgagaaccttactatttcgaattttacaga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 catgtgatgatagagggatctgcaagtctttgagaaccttactatttcgaattttacaga 429

                                                                       
Query: 300 ataaagtgtgttaacttgtggtctggatattttcactctgttgacctagtcagtgtgggg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ataaagtgtgttaacttgtggtctggatattttcactctgttgacctagtcagtgtgggg 369

                                                                       
Query: 360 aaaaaaataaaacatgtaagacttcatcaaaattagatccctgagacataatgtttatta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaaaataaaacatgtaagacttcatcaaaattagatccctgagacataatgtttatta 309

                                                                       
Query: 420 cttatctaatcacatctgattttattaaacttgcttgcatgatatctaatattcctttaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cttatctaatcacatctgattttattaaacttgcttgcatgatatctaatattcctttaa 249

                                                           
Query: 480 tactttaaacatgtcctcaaataaaccaagcatataaaatattgcagt 527
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tactttaaacatgtcctcaaataaaccaagcatataaaatattgcagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 928
Length adjustment: 10
Effective length of query: 517
Effective length of database: 918
Effective search space:   474606
Effective search space used:   474606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)