ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGGAGCACTTACTATATTGTGCATCTCTAGATTGTACATAAACAT
AGGCCTTTGCATTTGGCTTTTCAAAAACCAAAGTTTGTACTATATCATGG
GGTTTTTATTGTGTTTACAGTATTCTTGCGTTTCCCTTTGTGAGCTGAGT
ATCAGTGTTGGGAGTTGGGAGAAAGGTCTCCTTTGTATAGAGTAGGATTG
CAAGGTTCCAATAGAATCCATGAGCTTTTGCATATGTGCACAAAATGCTA
ATGAGTACATTATTTCCTAGTGCTACCAGGAAAGCCAGTTTCCTTTTGGA
ATGCAAAATAAAAGATGCAGTGCACATAATAGCAGCTCTGGTTCTACCCG
CGCTTCTTGTCACAAGTGCTCTAAAAGAAGTCTTAGTGTGTATTATGTAA
TAGCCCAACACTGTGTGTGTGCACACTGGTGTCAATGGATATATATATTA
GAGGAGAAAACAGGGTGCATTTGATGGCTTTGCCTCCACATACATTATGG
ATGAATGTAGTATGCCATCAAAATTTTTGCTTAGAATAGAAAACACATTA
GAATGCAGATTGTACTGTTATCTTAAAGTGCAAAATAATTTCTTTGGTTC
ATAGTATAAAAATAGTTTCAGAATGACTCTCAGTTACTTCAGTTTTAAAT
GTAAGTAAAAAGATAAAAAAGTGGCAGTTAGAGTGCTCAGGTCATCAGAC
TGCTGGTAGTACTGTCAGCCTTGGGT

TGCGTGTGGCGGTGTTCCGTGATGCTCTAGGTTCCCAACATCGGCGCCCT
ACTCCTCTCCTCTCCGCCGCTCTCTGGAATATCACAAGAATCAGTCCGCC
GCCGATGGAAGAGCCGTTCCCGGGCGCACGGTCGCGTTCAGCCGCTGAGA
TGCCAGCTTAGGGTTTTCTCCGGCTTCGCCCTGTTCTGAGTGGACAACGG
ACCTAATTACACACACAACACAATCACAAACATCTAAAATAGTTGGCTTT
GCGGGTGCGGACTACGTTCCGCTCCGTACTCGCTTTCTGGAGGTTGGGGG
CGGCGCCGGCGCTCGCGCTTTCTTTTCTTGGCATAGTTGCCGCGATCCCG
AGCGACTTTCGGCGCCCGGCGCACGATCTTGGTGTCTTTCTTTTTATTCC
GCGCGCGTTCGACCGCCTCCGTTTTATCTACCTGCTTCTCTCCGTACGCG
CCCGCGCATTGCCTTAGCTTTTTCTCATTAGGGCGCGGTGTTCTTTGTGT
ACTCTTATATTCCGTTCGCATTATTTTGATTAGTTTAAGCATACTCCCCA
GAGATTTGCGATCAACCCGTATTATTTTATTGTGAGTTTTCTACGGTACA
TGCGGTCTAGTTTGTGTTCCACGCCGAGCCGCGCGTTTATCACGCAGGCC
TATATATATTAATAAAGCTGGATTATGTTTAACAGACGATACGACTTTTT
GTGTACCCGGCCGCGCACTCACACTCTAATTCTGCTTTCCGCTCCGTGCT
TGCACCCGCGGGCCCGTCGTACTACAGTACACCCCGTATGTGAGACACAT
AACCTCAATTACACGAGAAAGGTCGTACAGTACGATTCCCCCAATCATTA
TACACTAAGTAGTTGACTTACATCTTATCATACGGTCTAACCATACGAGA
GTTATATATACCTTATAGTATAGTACAGATGATCGTTTCTTTTATTTTAC
GTTCTATGTTGAGACACCTTATCGGTATATGAGGCGN

Query= MSMg01no471_k14.b1 MSMg01no471_k14.b1 CHROMAT_FILE:
MSMg01no471_k14.b1 PHD_FILE: MSMg01no471_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:59 2005
         (656 letters)



>mm_chr3_127571455_127572510
          Length = 1056

 Score = 1168 bits (604), Expect = 0.0
 Identities = 640/652 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaggagcacttactatattgtgcatctctagattgtacataaacataggcctttg 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattcaggagcacagactatattgtgcatctctagattgtacataaacataggcctttg 797

                                                                       
Query: 65  catttggcttttcaaaaaccaaagtttgtactatatcatggggtttttattgtgtttaca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 catttggcttttcaaaaaccaaagtttgtactatatcatggggtttttattgtgtttaca 737

                                                                       
Query: 125 gtattcttgcgtttccctttgtgagctgagtatcagtgttgggagttgggagaaaggtct 184
            ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 736 atattcttgcgtttacctttgcgagctgagtatcagtgtcgggagttgggagaaaggtct 677

                                                                       
Query: 185 cctttgtatagagtaggattgcaaggttccaatagaatccatgagcttttgcatatgtgc 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cctttgtatacagtaggattgcaaggttccaatagaatccatgagcttttgcatatgtgc 617

                                                                       
Query: 245 acaaaatgctaatgagtacattatttcctagtgctaccaggaaagccagtttccttttgg 304
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 616 acaaaatgctaatgagtacattctttcctagtgctaccaggaaagccagtttccttttgg 557

                                                                       
Query: 305 aatgcaaaataaaagatgcagtgcacataatagcagctctggttctacccgcgcttcttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 556 aatgcaaaataaaagatgcagtgcacataatagcagctctggttctacccgtgcttcttg 497

                                                                       
Query: 365 tcacaagtgctctaaaagaagtcttagtgtgtattatgtaatagcccaacactgtgtgtg 424
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 496 tcacaagtgctctaaaagaagtcttagtgtgtattacgtaatagcccaacactgtgtgtg 437

                                                                       
Query: 425 tgcacactggtgtcaatggatatatatattagaggagaaaacagggtgcatttgatggct 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tgcacactggtgtcaatggatatatatattagaggagaaaacagggtgcatttgatggct 377

                                                                       
Query: 485 ttgcctccacatacattatggatgaatgtagtatgccatcaaaatttttgcttagaatag 544
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 376 ttgcctccacatacattatggatgaatgtagtatgccatcaaagtttttgcttagaatag 317

                                                                       
Query: 545 aaaacacattagaatgcagattgtactgttatcttaaagtgcaaaataatttctttggtt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaaacacattagaatgcagattgtactgttatcttaaagtgcaaaataatttctttggtt 257

                                                               
Query: 605 catagtataaaaatagtttcagaatgactctcagttacttcagttttaaatg 656
           |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 256 catagtataaaaatagattcagaatgactctcagttacttcagttttaaatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)