GGGTGCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTAGCTCTGTACCCCATTTTAATGGGGTTATTTGA
TTTTCTAGAGTCCATCTTCTTGATATATATATATATGATATTAGTCCCCT
GTCTGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGATGGCCTTT
TTGTCTTATTGACAGTGCCTTTTGCCTACAGAAGCTTTGCAACTTTATGA
GTTCCCATTTGTCAATTCTAGGTCTTAAAGCACAAGCCATTGCAGTTCTA
TTCACGAATTTTCCTCCTGTGCCCATATAACAGAAAATGTGGTACATTTA
CACAATGGAGTACTCCTCAGCTATTTCAAACAATGAATTTATGAAATTCC
AGGAAAATGGATGGATCTGGAGGGTATCATCCTGAGTGAGGTAACCCAAT
CACAAAAGAACTCACATGATATACATTCACTGATAAGTGAATAGCCCAGA
AACTTAATATACCCAAGATACAATTTATAAAACACATGAAACTTAAAAAG
AAGAAAGACCAAATTATGGATATTTTGCCCCTTTTTAAAATTTGGAACAA
AATACCCATGAAAGGAGTTACAGAGAAAAAGTTTGGAGCTGAGACAAAAG
GATGGACCATCCACAGACTGCCCCACCCAGGATCCATACCATAATCAGCC
ACCAAACGCAGACACTATTGCATACACCAGCAAGATTTTGCG

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGCTCCTCCAGCTGCATA
CCAGCCTGCATGCTACCATGCTTCTTGCTATGATAATCATGGGATGAGCC
TTAGAACCAGCAAATCACCCACAATTAAATGTCATAAGATTTGCTTTGAT
TGTGGTGACTCTTGACAGCAATGGAAACTCTAACTAAAACAATCTTAGAC
CTATTAAAATGGCTAAAATAAAAAAAAAATCAAGTGATATCACATCCTGG
CAATAATATAGAGCAAGGAGAATACTTTTCCTGCCCCAGTGCAAGTGCAA
ACTTCTGTCATAGTTCTAATAATCATTAACGTAAACTGAAAGATTATAAA
TCTTCATTCTAATATTCAATTCTTTTGCTATAAAATTAGATTGATCCTAA
CAATAAGCTCCAGGAAATCAGTTCTGAGGTGGTCAAGGCCAGTGTGTACA
TGCCAACAAATCCAGTTCTCAGCATTAGAAACAAAAAGAAAAGAATAAAA
AGAAAGAAATATTATGCAAATTCTTAATTATAATGGAAATAAAAGTTTTA
ATTTATGTTAAAGAGAAGCTTTTTTTTTTAAACACAGAATAGTGACTTCA
ATCATGACCATCATTATAAGCATGGGTACAAACAGCTTAATTGCTGCTAA
CAAAAACTGTGTGGTCTATGTTACAATATAGACTATAACACATTAT

Query= MSMg01no471_m04.g1 MSMg01no471_m04.g1 CHROMAT_FILE:
MSMg01no471_m04.g1 PHD_FILE: MSMg01no471_m04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:08 2005
         (662 letters)



>mm_chr3_13192082_13193144
          Length = 1063

 Score = 1131 bits (585), Expect = 0.0
 Identities = 588/589 (99%), Gaps = 1/589 (0%)
 Strand = Plus / Minus

                                                                        
Query: 75   aaccagcaaatcacccacaattaaatgtcataagatttgctttgattgtggtgactcttg 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 aaccagcaaatcacccacaattaaatgtcataagatttgctttgattgtggtgactcttg 1004

                                                                        
Query: 135  acagcaatggaaactctaactaaaacaatcttagacctattaaaatggctaaaataaaaa 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 acagcaatggaaactctaactaaaacaatcttagacctattaaaatggctaaaataaaaa 944

                                                                        
Query: 195  aaaaatcaagtgatatcacatcctggcaataatatagagcaaggagaatacttttcctgc 254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  aaaaatcaagtgatatcacatcctggcaataatatagagcaaggagaatacttttcctgc 884

                                                                        
Query: 255  cccagtgcaagtgcaaacttctgtcatagttctaataatcattaacgtaaactgaaagat 314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883  cccagtgcaagtgcaaacttctgtcatagttctaataatcattaacgtaaactgaaagat 824

                                                                        
Query: 315  tataaatcttcattctaatattcaattcttttgctataaaattagattgatcctaacaat 374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823  tataaatcttcattctaatattcaattcttttgctataaaattagattgatcctaacaat 764

                                                                        
Query: 375  aagctccaggaaatcagttctgaggtggtcaaggccagtgtgtacatgccaacaaatcca 434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  aagctccaggaaatcagttctgaggtggtcaaggccagtgtgtacatgccaacaaatcca 704

                                                                        
Query: 435  gttctcagcattagaaacaaaaagaaaagaataaaaagaaagaaatattatgcaaattct 494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703  gttctcagcattagaaacaaaaagaaaagaataaaaagaaagaaatattatgcaaattct 644

                                                                        
Query: 495  taattataatggaaataaaagttttaatttatgttaaagagaagc-ttttttttttaaac 553
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 643  taattataatggaaataaaagttttaatttatgttaaagagaagctttttttttttaaac 584

                                                                        
Query: 554  acagaatagtgacttcaatcatgaccatcattataagcatgggtacaaacagcttaattg 613
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583  acagaatagtgacttcaatcatgaccatcattataagcatgggtacaaacagcttaattg 524

                                                             
Query: 614  ctgctaacaaaaactgtgtggtctatgttacaatatagactataacaca 662
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523  ctgctaacaaaaactgtgtggtctatgttacaatatagactataacaca 475


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space:   686556
Effective search space used:   686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)