Query= MSMg01no472_c08.b1 MSMg01no472_c08.b1 CHROMAT_FILE:
MSMg01no472_c08.b1 PHD_FILE: MSMg01no472_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:40 2005
(530 letters)
>mm_chr3_143499217_143500146
Length = 930
Score = 936 bits (484), Expect = 0.0
Identities = 510/530 (96%), Gaps = 18/530 (3%)
Strand = Plus / Plus
Query: 1 ttgctggctagagaagatgtgtgttctttctcggtcaacatgttttcaaaatggcgtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttgctggctagagaagatgtgtgttctttctcggtcaacatgttttcaaaatggcgtggt 278
Query: 61 agtatctgtggtcactctctctctcctcttctgcctgtccctgtcacttgttcttttctt 120
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 279 agtatctgtggtcactctctct------------------ctgtcacttgttcttttctt 320
Query: 121 ctcttgcttccagttgtgacaattgcctttagtcattgctttgtctggtcttggatactt 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ctcttgcttccagttgtgacaattgcctttagtcattgctttgtctggtgttggatactt 380
Query: 181 ggtgtagtgagtgaggtttttccatgtgtgtgctacaatgatttcaccatccatgccttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 ggtgtagtgagtgaggtttttccatgtgtgtgctacaatgatttcaccatccatcccttt 440
Query: 241 ctcttctctctgctagtatcaaatatggagagaaagttccttatgtcagtcttctttcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcttctctctgctagtatcaaatatggagagaaagttccttatgtcagtcttctttcca 500
Query: 301 ttttctttctcttgtggatatggcgttgaattgcctttagcctatactcagatcataaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttctttctcttgtggatatggcgttgaattgcctttagcctatactcagatcataaaa 560
Query: 361 ggttctttcatttattctaaatgttttaatatttaactccacattcagatatttgactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttctttcatttattctaaatgttttaatatttaactccacattcagatatttgactca 620
Query: 421 ccagaaatgtgtttgagtgcttattatgaaataataactctcaaatttttaggaggtggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagaaatgtgtttgagtgcttattatgaaataataactctcaaatttttaggaggtggg 680
Query: 481 gagataactcatgcagaaatacttactacacatgtgtgaggatgtgagtt 530
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagataactcatgcagaaatacttactacacatgtgtgaggatgtgagtt 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_c08.g1 MSMg01no472_c08.g1 CHROMAT_FILE:
MSMg01no472_c08.g1 PHD_FILE: MSMg01no472_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:41 2005
(436 letters)
>mm_chr3_143692500_143693335
Length = 836
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%)
Strand = Plus / Minus
Query: 2 ttccttcagaagaaataatgtgtttatatttaaaagtggttgttataaagatctcaatgc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ttccttcagaagaaataatgtgtttatatttaaaagtggttgttataaagatctcaatgc 577
Query: 62 tcagcccaggtgggagatgtgtagttctcatcatggtattttgtgaacctgagtctgata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tcagcccaggtgggagatgtgtagttctcatcatggtattttgtgaacctgagtctgata 517
Query: 122 gcccaggtttaagttaaaagggtgtcttcaaacaagaggtccagagcccatttctctaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gcccaggtttaagttaaaagggtgtcttcaaacaagaggtccagagcccatttctctaat 457
Query: 182 cactcctgagtgttctgtatcagtgcaaggctccccagagtgtcaggatttccttcagtg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cactcctgagtgttctgtatcagtgcaaggctccccagagtgtcaggatttccttcagtg 397
Query: 242 gttttgttgagttcaccagacttgctctcagctatagctgctgtgcatgcttgcttgttc 301
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggtttgttgagttcaccagacttgctctcagctatagctgctgtgcatgcttgcttgttc 337
Query: 302 acagtgtcccagtgtagaagagggtgagaaccatgagtagctacataggcttcagcggct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acagtgtcccagtgtagaagagggtgagaaccatgagtagctacataggcttcagcggct 277
Query: 362 ttccttattactgtgcagtgtactggagtggaaagtgctggtcaccaccttcacctgcca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttccttattactgtgcagtgtactggagtggaaagtgctggtcaccaccttcacctgcca 217
Query: 422 ctctggagaccaggg 436
||||| |||||||||
Sbjct: 216 ctctgaagaccaggg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
