Query= MSMg01no473_a11.b1 MSMg01no473_a11.b1 CHROMAT_FILE:
MSMg01no473_a11.b1 PHD_FILE: MSMg01no473_a11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:53 2005
(676 letters)
>mm_chr3_43111887_43112962
Length = 1076
Score = 1272 bits (658), Expect = 0.0
Identities = 670/674 (99%), Gaps = 2/674 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcttttttctccct-gttttgtaatcataacaacatttcaaggtcagtttaca 62
|||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttttttc-ctcttgttttgtaatcataacaacatttcaaggtcagtttaca 262
Query: 63 gaaagtttacttgaaattactaaatgctaatgaacccaataataaatttaaatggatttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaaagtttacttgaaattactaaatgctaatgaacccaataataaatttaaatggatttt 322
Query: 123 atttagggaatagctatcttaaatttcaatgcttctcagtattactcatttatgaaatgc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atttagggaatagctatcttaaatttcaatgcttctcagtattactcatttatgaaatgc 382
Query: 183 atttaattttctaatttattaatattttgattagaatcctttaaatgttctcaacaggat 242
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 atttaattttctaatttattaatattttgattagaatcctttaaattttctcaacaggat 442
Query: 243 gaatgaataaaagttagacaaattgattattgggaaaaattcattttcaatctctgattc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaatgaataaaagttagacaaattgattattgggaaaaattcattttcaatctctgattc 502
Query: 303 cagatgaatttgtaagctttagaaaattggaaagtctttgaacaatgagtatgactttta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cagatgaatttgtaagctttagaaaattggaaagtctttgaacaatgagtatgactttta 562
Query: 363 attatttcatataattccaattatatacactacacttttactgaggagagcaaagactta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 attatttcatataattccaattatatacactacacttttactgaggagagcaaagactta 622
Query: 423 tcaaatagtaatgtatctgaaatgaaagatgtcctccatttattaattgacttctttttc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcaaatagtaatgtatctgaaatgaaagatgtcctccatttattaattgacttctttttc 682
Query: 483 atttacaatactcataatctaaaattacttttaacaagctctcctgataaatttcagtat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atttacaatactcataatctaaaattacttttaacaagctctcctgataaatttcagtat 742
Query: 543 agaaaatggcaccagaggaagtacaaagtagtgagaaattgtttgagcacctaaaattca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agaaaatggcaccagaggaagtacaaagtagtgagaaattgtttgagcacctaaaattca 802
Query: 603 aataatttcactttcattgtcaagaaagatttctttattgcaaatcaaagtaatttcttg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aataatttcactttcattgtcaagaaagatttctttattgcaaatcaaagtaatttcttg 862
Query: 663 gttacattaattgg 676
||||||||||||||
Sbjct: 863 gttacattaattgg 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_a11.g1 MSMg01no473_a11.g1 CHROMAT_FILE:
MSMg01no473_a11.g1 PHD_FILE: MSMg01no473_a11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:53 2005
(500 letters)
>mm_chr3_43285492_43286391
Length = 900
Score = 215 bits (111), Expect = 7e-60
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 390 ttttttttttttaaacaaatactaaacgttggtgttctgctgtcacaatatatataaacg 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ttttttttttttaaacaaatactaaacgttggtgttctgctgtcacaatatatataaacg 642
Query: 450 agataggacatgatcacttatctatgtaaatgtgctggtgttgttttctca 500
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agataggacatgatcacttatctatgtaaatgtgctggtgttgttttctca 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
