MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-473B16
Chromosome	3 (Build37)
Map Location	122,808,437 - 122,808,896
singlet/doublet	singlet
Overlap gene	Synpo2
Upstream gene	Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l, Ppia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2
Downstream gene	Sec24d, G430022H21Rik, Prss12, EG668804, Ndst3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Abca4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11304 MGI:109424
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668788 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668788 MGI:3643912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	LOC626807 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100043724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 129 mRNAs, 3998 ESTs, 21 Proteins

name	Gclm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14630 MGI:104995
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps3_1245.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606529
definition	note : peptidylprolyl isomerase A pseudogene 3_1245.1 pseudo : _no_value

name	Dnttip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99480 MGI:1923173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675117 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675117
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043726 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Bcar3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29815 MGI:1352501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fnbp1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214459 MGI:1925642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps3_2252.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546810
definition	note : eptidyl-prolyl cis-trans isomerase A pseudogene 3_2252.1 pseudo : _no_value

name	Pde5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242202 MGI:2651499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 4 Proteins pseudo : _no_value

name	Fabp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14079 MGI:95478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810037I17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67704 MGI:1914954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp53 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99526 MGI:2139607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myoz2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59006 MGI:1913063
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Synpo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:118449 MGI:2153070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 2 Proteins

name	Sec24d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69608 MGI:1916858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	G430022H21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210529 MGI:2442926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prss12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19142 MGI:1100881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668804 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668804 MGI:3645990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs

name	Ndst3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83398 MGI:1932544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abca4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671494 GeneID:11304 MGI:109424
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family A (ABC1), member 4 transcript_id : NM_007378.1

name	LOC100043724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251466 GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 108 mRNAs, 2501 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001481018.1

name	LOC100043724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251464 GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 88 mRNAs, 1993 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001481014.1

name	LOC100043724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251462 GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 129 mRNAs, 3996 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001481013.1

name	Gclm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373116 GeneID:14630 MGI:104995
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate-cysteine ligase , modifier subunit transcript_id : NM_008129.3

name	Dnttip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418930 GeneID:99480 MGI:1923173
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deoxynucleotidyltransferase, terminal, interacting protein 2 transcript_id : NM_153806.1

name	LOC675117 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251383 GeneID:675117
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to TBP-associated factor 4 transcript_id : XM_001479930.1

name	LOC100043726 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251468 GeneID:100043726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100043726 transcript_id : XM_001481020.1

name	Bcar3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7304924 GeneID:29815 MGI:1352501
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast cancer anti-estrogen resistance 3 transcript_id : NM_013867.1

name	Fnbp1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346554 GeneID:214459 MGI:1925642
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formin binding protein 1-like transcript_id : NM_153118.1

name	Pde5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23510316 GeneID:242202 MGI:2651499
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 5A, cGMP-specific transcript_id : NM_153422.1

name	Fabp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982371 GeneID:14079 MGI:95478
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid binding protein 2, intestinal transcript_id : NM_007980.2

name	1810037I17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286833 GeneID:67704 MGI:1914954
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810037I17 gene transcript_id : NM_024461.2

name	Usp53 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371445 GeneID:99526 MGI:2139607
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 53 transcript_id : NM_133857.2

name	Myoz2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946915 GeneID:59006 MGI:1913063
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myozenin 2 transcript_id : NM_021503.1

name	Synpo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369843 GeneID:118449 MGI:2153070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 2 Proteins product : synaptopodin 2, transcript variant 1 transcript_id : XM_619958.3

name	Sec24d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560564 GeneID:69608 MGI:1916858
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC24 related gene family, member D (S. cerevisiae) transcript_id : NM_027135.2

name	G430022H21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42517135 GeneID:210529 MGI:2442926
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA G430022H21 gene transcript_id : NM_201638.1

name	Prss12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679484 GeneID:19142 MGI:1100881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protease, serine, 12 neurotrypsin (motopsin) transcript_id : NM_008939.1

name	EG668804 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251471 GeneID:668804 MGI:3645990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs product : predicted gene, EG668804 transcript_id : XM_001003710.2

name	Ndst3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043952 GeneID:83398 MGI:1932544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 transcript_id : NM_031186.2

name	Abca4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671495 GeneID:11304 MGI:109424
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence TAS]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005548 - phospholipid transporter activity [Evidence IMP]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IMP] GO_process : GO:0006649 - phospholipid transfer to membrane [Evidence IMP]; GO:0045494 - photoreceptor maintenance [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : rim protein; RmP; Rim protein; ATP-binding cassette 10 product : ATP-binding cassette, sub-family A, member 4 protein_id : NP_031404.1

name	LOC100043724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251463 GeneID:100043724
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001481063.1

name	LOC100043724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251465 GeneID:100043724
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001481064.1

name	LOC100043724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251467 GeneID:100043724
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001481068.1

name	Gclm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680019 CCDS:CCDS17808.1 GeneID:14630 MGI:104995
definition	GO_function : GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : glutamate cysteine ligase (gamma-glutamylcysteine synthetase), regulatory product : glutamate-cysteine ligase , modifier subunit protein_id : NP_032155.1

name	Dnttip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418931 CCDS:CCDS17809.1 GeneID:99480 MGI:1923173
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : acidic 82 kDa protein mRNA product : acidic 82 kDa protein protein_id : NP_722501.1

name	LOC675117 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251384 GeneID:675117
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479980.1

name	LOC100043726 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251469 GeneID:100043726
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481070.1

name	Bcar3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304925 CCDS:CCDS17810.1 GeneID:29815 MGI:1352501
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : breast cancer anti-estrogen resistance 3 protein_id : NP_038895.1

name	Fnbp1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346555 CCDS:CCDS17811.1 GeneID:214459 MGI:1925642
definition	codon_start : 1 product : formin binding protein 1-like protein_id : NP_694758.1

name	Pde5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510317 CCDS:CCDS17812.1 GeneID:242202 MGI:2651499
definition	GO_function : GO:0047555 - 3',5'-cyclic-GMP phosphodiesterase activity [Evidence IEA]; GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0030553 - cGMP binding [Evidence IDA]; GO:0004112 - cyclic-nucleotide phosphodiesterase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0046069 - cGMP catabolism [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cGMP-binding/cGMP-specific phosphodiesterase product : phosphodiesterase 5A, cGMP-specific protein_id : NP_700471.1

name	Fabp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679737 CCDS:CCDS17813.1 GeneID:14079 MGI:95478
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : fatty acid binding protein intestinal; intestinal fatty acid binding protein 2 product : fatty acid binding protein 2, intestinal protein_id : NP_032006.1

name	1810037I17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313570 GeneID:67704 MGI:1914954
definition	codon_start : 1 product : hypothetical protein LOC67704 protein_id : NP_077781.1

name	Usp53 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469031 CCDS:CCDS17815.1 GeneID:99526 MGI:2139607
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 note : per-hexamer repeat gene 3 product : ubiquitin specific protease 53 protein_id : NP_598618.1

name	Myoz2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946916 CCDS:CCDS17816.1 GeneID:59006 MGI:1913063
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA] [Evidence IPI]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 note : calsarcin-1; myozenin-like 2 product : myozenin 2 protein_id : NP_067478.1

name	Synpo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82890950 GeneID:118449 MGI:2153070
definition	codon_start : 1 product : synaptopodin 2 isoform 1 protein_id : XP_619958.2

name	Sec24d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560565 GeneID:69608 MGI:1916858
definition	GO_component : GO:0030127 - COPII vesicle coat [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 product : SEC24 related gene family, member D protein_id : NP_081411.2

name	G430022H21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42517136 GeneID:210529 MGI:2442926
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008168 - methyltransferase activity [Evidence IEA] GO_process : GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : snoRNA MBII-84 product : hypothetical protein LOC210529 protein_id : NP_964000.1

name	Prss12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679485 CCDS:CCDS17817.1 GeneID:19142 MGI:1100881
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004720 - protein-lysine 6-oxidase activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : protease, serine, 12 neurotrypsin (motopsin) protein_id : NP_032965.1

name	EG668804 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251472 GeneID:668804 MGI:3645990
definition	codon_start : 1 product : similar to 14-3-3 protein theta-subtype protein_id : XP_001003710.2

name	Ndst3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71043953 CCDS:CCDS17818.1 GeneID:83398 MGI:1932544
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008146 - sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0015016 - [heparan sulfate]-glucosamine N-sulfotransferase activity [Evidence IEA] codon_start : 1 product : N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein_id : NP_112463.2

name	EG668788 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668788
definition	number : 1 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 9 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 8 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 7 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 6 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 5 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 4 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 3 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 2 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 1 pseudo : _no_value

name	LOC668792 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251470 GeneID:668792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 4 Proteins product : hypothetical LOC668792 pseudo : _no_value transcript_id : XR_034948.1

clone name	MSMg01-370F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347P21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-166D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094L09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-170C24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-091K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-518K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378I14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-319N08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-463P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212J12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-473B16.T7 (MSMg01no473_b16.b1)	MSMg01-473B16.TJ (MSMg01no473_b16.g1)
ACC	AG555482	AG555483
length	1,693	774
length of high quality (start - end)	---	454 (75 - 528)
definition	CHROMAT_FILE: MSMg01no473_b16.b1 PHD_FILE: MSMg01no473_b16.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:51:00 2005	CHROMAT_FILE: MSMg01no473_b16.g1 PHD_FILE: MSMg01no473_b16.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:51:00 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	AAACATATAACAATATTATCAGAGAGNAGAGATNATACAGAGATAGCAGA CTGTCTGCGCTTGCTCTCTCCACCTCCGATATGACGGGTAGCTGCTGCGT CGTCGTGCTCGTGGCGGTATTATACCTACTCATCCGAGCCACTCTACAGT GAACGCGCGAGCGGCGCATATCAGCAGCTCGCTGTCNCTTGGTCCAGACG TCGGCTCCGCGAGGCCTACAGGACGCGTTATCGATTACATACTGTATAAT CTGGTGNTCGCTCTAGCTACCACACTACGTCATGGACCTGTCAATAAGTT TAGGAAATAGAACTAGGACAAAACTTGCACATAGAGAGATGTCACCGAAC TACCAATATATTCGAGGACGTAGCGTATGTATTACGAGAAATAGTGCGTC ATAAGACACGACAACGATACAGCACCAGATAGAGTAGGAGGAGCGTGAGC GTGGATCTAAGCACCCGTAGATGTAATAGAATCATCAGTGTGCGTTGACA TATGTGCAGATGTAGTCATAATAGAGAAAATGAAATATACGTAAGAAACA TACTCCGACCACATACAACAGCTGTCATATAGAGTGCATANCATCTGTCG CTAGACTACCAGAGACATACAGTCACTAACGATGTTACGAGCGAACAACG AGAGCGGCTCTCAAGTGCGGTGTTGAAGCTCGTTCATATTCAGACGATTA AGTATGACGATATCGTGGCTTGGTATATGAGCACTTGACGAACAGAGAAT AAGTAGTAGAGCATCGGCGGGTGATTGGAGGAAATGTATCAGCGGCGTAG GAGCGCGTGTGATGGATAGTGATACGGCATTCGTACATAGAATGAGTTCA CGATCACACCCAGAGCGACCATGCTTGGACTATAGTCGGACCTGGAGTCG AGTTACGATAGTGGTANGAGGATACGGTGGTGTATATATGATCACACTAT CTGACTCAACATATCCCTACTCGCTGNCATGCTCTCGACAAGCTCNCTAT GCGTCTATGAAATGAACACGAATCTGCACAATCATGTATGGCATGATATG TACGTGTAGCNTCGATCAGTGTGTCTCCATCCGTGTATNAGACGACAGAG TACGCAGTNCTGCGTGTGTCAGCTGATGACGATGCACTCANACTCGCCAA GTCAGACAAGGAGCGCTCTGGTACGTATACTCCGACATCTGACTAATCAC ACTGAGACAGACACGATACTGTAGATCAGCGCNCGACGTCTACTCCATCT NACATCGCCGCATGCGCGTCTGACTGATGTGTGCTGTATGCGATAGACGG ACATATGANCGATAGTGTGATTACGTATTGTCTCTACACGNCANTTACTA GTCTGCAGCCATCGCTGTACTATGAGATANTTGCCCACAGATACGATACT ATGTCTATGCTCACGTATATACATCGACCATGCCACTAGCATGTAGCTAC AGCTAAGCGTTGATGNCTCATATCGCTAATGGAGTACACACTACTCTATG CGCAGTCACGGCTGATCGCTGAAGCGCATGACGTGCTCTACGTGCGCGTG TACGTCGGGAGGATATGCATCTGATACGCGTCACTGTNCGACATACTCGT GCTCCCAGATACCAGCTGTATGAGTCGGTACTAGTGTATGCGANTGTGAC GTGCTCTAGATCTCTTAANCGGCGTATATGCTCGTTGACACAG	NCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXCTGTCCTGACCTCCTTCAATGACAGA CAAGAATGTGAATGGGTAAGCCAGATGAACCCTCTCCTCCCCAACTCGCT TTTGGACATGGTGTTTCTTCACAGCATATAAGCCTAAGACAGGGAGGGTT GTCTGTCTTGGGGGAATCTTCCAATGGGGTCTGCATAGCAGGAAGGGTTG ATTCCCCCCCCAGGTACATCTAGGGTGGCTGCTGCCTCAGCTGGAAGTGT CACCCTCACAGGTCCCAGTGATAACTACTCGTGTTCTTTGAAACACTGGA AGCTGGTGAGTCTCCCATTATAATTCTGCTTAGCAGTACTGTTAGGATGC CCAAAGCGATAGGTTTTGAATTACCCAACTATCTAATAGGAAATTTCTTT GAATTCCCTCGGGGGGGGGGATGCATAAAACCAAGGAATCATTCCTTTTG TTTAGTCTGCATTTCTTCTTGTGCACACCCCTCCTCCCTCCCTCCATCCT ACCCTCTGCATCACCAACCCCCTTTCTCATGTTCTGTTGGGCTCTTATCT TACTTTATTCCTTCCAGGGCCTCACACACATGCTATAAAAGTGATCTACC CTTGTAGCTATATTTTCTAGCTCCGACCCCTTTTTTCTAATTTTATTCCC TTGGTTTTTCTTAAGGCTGTGTACTCTGTCCTAAAAAATTCATTTGTTTA AATCGTATTTCTCCCCCCCAAATN
quality values	Open. Hide. 8 8 6 6 6 10 11 8 8 9 8 8 6 10 7 6 6 6 8 6 11 11 8 8 7 3 0 3 10 8 8 9 3 0 3 6 6 6 6 11 8 9 8 8 8 8 8 8 10 8 8 6 6 8 8 10 10 8 8 8 9 6 6 6 6 7 7 6 6 10 10 8 8 8 6 6 6 6 6 6 8 6 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 11 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 10 8 9 9 9 9 9 10 10 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 8 6 6 8 6 8 8 8 8 8 8 3 0 3 6 8 10 6 6 6 6 6 6 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 7 8 6 9 9 8 8 8 8 8 6 8 6 6 10 6 8 8 8 6 6 6 6 8 8 8 8 6 6 6 6 6 6 7 9 3 0 3 13 13 6 6 6 6 6 8 6 6 6 6 8 10 6 6 6 8 6 6 6 6 8 6 8 8 8 8 8 8 8 6 6 6 6 8 6 6 6 6 6 6 9 10 11 11 8 8 6 6 6 6 8 9 10 9 10 11 11 11 10 10 8 8 8 8 12 9 9 8 8 8 8 8 8 9 9 9 8 6 6 6 6 8 8 10 10 8 6 6 6 6 8 8 8 6 6 6 6 8 8 8 8 8 8 6 6 7 8 8 8 8 8 8 8 10 10 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 6 6 6 10 8 10 7 7 6 6 8 8 9 9 10 10 11 8 8 8 8 8 8 8 6 6 6 6 6 8 8 8 8 6 6 6 6 8 6 6 6 6 10 7 9 9 9 9 8 8 8 8 8 8 8 8 9 9 9 9 11 10 8 7 6 6 8 10 8 8 8 8 7 7 8 8 6 6 6 8 6 6 8 8 6 6 6 6 6 6 6 6 11 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 6 6 8 8 10 8 8 6 6 7 7 7 8 10 8 8 6 6 6 10 8 9 11 12 9 9 8 8 8 8 8 9 10 10 10 9 9 10 10 9 9 7 7 7 8 8 8 8 8 8 9 8 8 8 8 8 8 8 11 11 13 10 10 10 10 10 10 10 8 8 8 8 8 6 7 3 0 3 8 8 6 6 6 6 6 8 6 6 8 8 8 8 8 6 6 6 8 8 8 10 10 10 10 9 9 9 9 9 9 9 6 6 6 6 8 8 11 6 6 6 6 6 6 6 6 10 8 8 7 7 8 8 8 7 7 8 8 10 10 8 6 6 8 8 8 11 8 8 10 8 8 6 7 10 8 8 9 8 6 8 6 8 7 12 8 8 11 11 19 10 8 6 6 8 6 6 8 6 6 8 8 6 6 6 8 8 8 6 8 6 6 6 6 13 13 16 10 8 8 8 8 8 8 10 10 10 8 8 6 6 6 8 8 10 8 9 9 9 9 9 9 10 8 8 8 8 8 8 8 8 6 6 6 6 8 6 7 6 6 8 8 8 8 6 6 6 6 8 8 8 6 6 6 6 9 10 10 10 10 10 10 10 8 6 6 8 8 8 6 6 10 6 6 6 6 6 6 11 9 9 9 9 6 8 6 6 8 8 8 11 11 10 11 12 11 11 8 8 8 8 8 8 8 8 8 8 8 8 8 10 15 11 11 10 10 10 10 10 11 11 11 10 10 8 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 10 8 11 11 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 6 7 7 8 8 8 6 8 6 6 6 10 8 9 9 8 10 8 6 6 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 3 0 3 6 8 6 6 8 6 6 8 6 8 8 8 9 9 11 8 8 8 9 10 8 13 6 6 6 6 6 7 8 8 8 8 8 8 8 8 8 8 11 6 6 6 6 10 6 8 6 6 6 6 6 6 8 6 6 8 8 3 0 3 8 8 8 10 8 6 6 6 6 8 12 9 10 10 10 10 3 0 3 7 8 8 8 8 10 9 9 9 8 8 8 8 8 8 8 9 9 9 9 6 6 6 6 6 8 8 8 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 7 6 8 6 8 8 10 8 8 6 6 6 6 6 8 8 6 6 3 0 3 8 8 9 6 6 6 6 7 6 6 6 6 8 8 8 6 6 8 6 6 7 6 6 6 6 3 0 3 6 6 6 6 6 8 10 11 8 10 6 6 6 6 10 7 6 3 0 3 8 8 10 11 12 8 10 6 6 6 6 6 6 10 8 9 9 10 10 12 13 10 10 9 9 10 10 10 11 3 0 3 9 9 11 10 8 7 7 7 8 6 8 6 6 7 7 8 8 8 8 8 9 11 11 9 7 7 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 6 6 8 8 8 8 8 8 6 6 8 8 6 6 10 10 12 9 13 9 10 6 6 6 6 6 8 6 8 8 8 8 8 6 6 6 7 7 11 8 8 8 8 9 9 9 9 9 3 0 3 6 6 6 8 6 8 10 8 6 6 6 6 8 10 10 3 0 3 8 8 8 6 6 6 6 8 11 11 11 20 11 6 8 6 6 8 6 8 6 8 8 8 9 9 8 6 8 6 6 8 8 8 8 8 8 8 8 8 8 7 7 7 8 8 8 8 6 6 6 6 8 8 8 3 0 3 6 8 12 10 8 6 8 6 7 8 6 8 8 8 8 10 10 8 6 6 8 6 9 9 12 8 8 6 6 3 0 3 3 0 3 6 6 6 6 6 6 7 6 7 7 8 8 8 8 8 6 6 6 6 6 6 6 6 9 10 9 7 7 7 8 8 8 9 3 0 3 11 8 8 8 6 6 6 6 6 8 10 8 8 8 8 8 8 8 8 15 11 11 11 11 11 17 11 11 11 11 11 16 10 9 9 9 9 10 9 10 11 13 9 8 8 6 7 6 6 6 6 8 6 6 6 6 6 7 8 9 10 11 6 6 6 8 8 8 9 8 8 8 12 9 9 9 10 6 6 6 6 6 8 3 0 3 6 6 6 6 8 6 8 7 8 7 7 7 8 11 10 8 8 8 8 8 9 9 10 8 8 8 8 8 10 9 9 10 10 10 12 7 6 6 6 6 6 7 7 6 6 6 6 6 6 8 6 6 6 6 6 6 9 9 11 11 11 8 8 8 10 8 6 6 6 6 8 8 7 7 7 7 6 6 6 6 6 11 10 10 9 6 6 8 6 9 9 7 9 10 9 9 12 11 8 8 9 9 7 8 8 8 8 6 8 6 8 6 6 8 8 10 12 11 13 3 0 3 8 8 8 6 8 6 6 8 6 8 8 9 9 8 8 8 8 8 8 9 8 10 8 6 10 6 6 6 8 10 10 10 10 10 6 6 6 6 6 6 8 6 8 8 6 8 6 6 6 6 8 8 9 3 0 3 8 8 8 8 8 8 8 8 9 6 6 6 6 8 6 8 8 8 6 6 6 6 3 0 3 6 6 6 6 6 6 6 10 8 9 9 9 8 11 8 8 8 8 11 11 13 13 13	Open. Hide. 0 3 8 8 8 10 10 9 9 19 21 10 10 10 15 28 37 32 37 39 39 39 39 37 31 31 37 32 28 35 23 17 9 9 11 13 10 11 11 11 19 21 37 37 37 39 37 37 39 39 39 47 47 53 50 50 50 50 37 28 15 17 8 9 9 10 13 20 14 25 22 22 31 29 44 53 57 57 57 57 36 42 37 37 40 50 59 59 50 50 48 48 48 51 51 47 42 42 42 47 47 47 47 50 50 50 50 43 50 50 50 50 50 51 51 68 68 68 68 68 68 68 57 57 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 59 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 52 52 52 59 59 59 59 57 57 57 57 57 57 57 44 43 43 52 52 57 57 59 68 68 59 57 57 57 57 57 57 57 68 59 57 57 57 57 57 68 68 68 57 50 50 50 50 50 33 38 27 27 20 27 27 43 43 43 50 50 43 43 35 35 44 43 50 52 50 50 57 50 57 57 37 43 42 34 32 28 28 19 34 30 43 43 38 38 37 39 41 57 57 57 47 36 36 19 19 20 25 24 24 19 12 18 17 26 26 15 17 17 41 34 47 41 41 41 41 41 47 47 37 32 31 22 22 31 31 42 42 31 25 19 19 13 12 12 16 23 29 35 35 35 39 39 39 39 39 30 27 11 12 12 11 17 17 13 10 10 10 12 16 12 12 9 9 9 9 9 9 10 9 10 10 14 28 35 32 29 29 32 22 12 9 9 11 15 12 9 9 8 12 8 8 8 8 9 13 9 9 9 9 9 10 13 13 10 10 9 9 9 10 10 10 10 10 11 10 11 9 9 10 15 12 11 10 10 9 9 9 9 10 15 19 10 8 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 10 10 19 21 14 19 13 11 9 9 10 10 18 10 10 8 8 8 8 11 9 16 18 17 13 8 8 8 8 8 8 8 8 10 10 8 10 9 8 10 12 8 6 7 8 8 11 13 17 11 11 10 10 10 10 10 9 9 9 8 8 8 11 6 6 8 8 6 7 8 8 7 9 9 8 10 8 8 8 8 8 12 9 6 8 8 8 8 15 7 8 8 8 8 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no473_b16.g1 MSMg01no473_b16.g1 CHROMAT_FILE:
MSMg01no473_b16.g1 PHD_FILE: MSMg01no473_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:00 2005
         (454 letters)



>mm_chr3_122808239_122809096
          Length = 858

 Score =  762 bits (394), Expect = 0.0
 Identities = 442/460 (96%), Gaps = 6/460 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgtcctgacctccttcaatgacagacaagaatgtgaatgggtaagccagatgaaccctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ctgtcctgacctccttcaatgacagacaagaatgtgaatgggtaagccagatgaaccctc 258

                                                                       
Query: 61  tcctccccaactcgcttttggacatggtgtttcttcacagca--tataagcctaagacag 118
           | ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 259 ttctccccagctcgcttttggacatggtgtttcttcacagcaattataagcctaagacag 318

                                                                       
Query: 119 ggagggttgtctgtcttgggggaatcttccaatggggtctgcatagcaggaagggttgat 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggagggttgtctgtcttgggggaatcttccaatggggtctgcatagcaggaagggttgat 378

                                                                       
Query: 179 tcccc--ccccaggtacatctagggtggctgctgcctcagctggaagtgtcaccctcaca 236
            ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccccccaccccaggtacatctagggtggctgctgcctcagctggaagtgtcaccctcaca 438

                                                                       
Query: 237 ggtcccagtgataactactcgtgttctttgaaacactggaagctggtgagtctcccatta 296
           |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||
Sbjct: 439 ggtcccagtgataactactcgtcttctttgaaacactggaagctggcgagtctcgcatta 498

                                                                       
Query: 297 taattctgcttagcagtactgttaggatgcccaaagcgataggttttgaattacccaact 356
           ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 499 taattctgcttagtagtactgttaggatgcccaaagtgatgggttttgaattacccaact 558

                                                                       
Query: 357 atctaataggaaatttctttgaattccctcgggggggggg--atgcataaaaccaaggaa 414
           |||||| ||||||||||||||||||| |||||||||||||  ||||||||| ||||||||
Sbjct: 559 atctaacaggaaatttctttgaattctctcggggggggggggatgcataaagccaaggaa 618

                                                   
Query: 415 tcattccttttgtttagtctgcatttcttcttgtgcacac 454
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcattccttttgtttagtctgcatttcttcttgtgcacac 658


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 858
Length adjustment: 10
Effective length of query: 444
Effective length of database: 848
Effective search space:   376512
Effective search space used:   376512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information