Query= MSMg01no473_d24.b1 MSMg01no473_d24.b1 CHROMAT_FILE:
MSMg01no473_d24.b1 PHD_FILE: MSMg01no473_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:15 2005
(534 letters)
>mm_chr3_108937303_108938236
Length = 934
Score = 967 bits (500), Expect = 0.0
Identities = 524/532 (98%)
Strand = Plus / Minus
Query: 3 gaattctaagtccatttgcatgaaattactgctacagtcatatgagaactgacacaggag 62
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 734 gaattctaagtccatatgaatgaaattactgctacagtcatatgagaactgacacagggg 675
Query: 63 aactgcttaggacatgtgatctttatgtgaggaaaggcccaagagttcttttaaaatata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aactgcttaggacatgtgatctttatgtgaggaaaggcccaagagttcttttaaaatata 615
Query: 123 atgttccatgtggttggtgcagagccttggggggagtggctcgttcttggttttgataat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 atgttccatgtggttggtgcagagccttggggggagtggctcgttcttggttttgataat 555
Query: 183 tgagcccttatccataatctatggatgtgcaaagcctcataccttttgccaagaagattt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgagcccttatccataatctatggatgtgcaaagcctcataccttttgccaagaagattt 495
Query: 243 tcaagaaaataaactgttgaaaaggaataagtgcgttttttatgatctaacttgcttacg 302
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 494 tcaagaaaataaactgttgaaaaggaataagtgcgtttcagaagatctaacttgcttacg 435
Query: 303 acaaaatccaggattccttctgcaaagctgatatcgaataagcaaatgcacatcatattt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acaaaatccaggattccttctgcaaagctgatatcgaataagcaaatgcacatcatattt 375
Query: 363 gaaagaagagggacccgggtcccaacagcaacttccatatggcagattcccaagtcttag 422
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 374 gaaagaagagggacccgggtcccaacagcaacctccatatggcagattcccaagtcttag 315
Query: 423 agttcctgcctctatgacatatatatctctgaggagttccaccaccacctcacattagat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agttcctgcctctatgacatatatatctctgaggagttccaccaccacctcacattagat 255
Query: 483 ctctgagtgctaagtcattaaaaggaccacctttgagaagcctttatcccaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctctgagtgctaagtcattaaaaggaccacctttgagaagcctttatcccaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_d24.g1 MSMg01no473_d24.g1 CHROMAT_FILE:
MSMg01no473_d24.g1 PHD_FILE: MSMg01no473_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:15 2005
(409 letters)
>mm_chr3_108745111_108745919
Length = 809
Score = 700 bits (362), Expect = 0.0
Identities = 397/414 (95%), Gaps = 10/414 (2%)
Strand = Plus / Plus
Query: 1 ttgctaaaactggcccatgcagtccaaagactgggatccagactcagagcaaagcctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgctaaaactggcccatgcagtccaaagactgggatccagactcagagcaaagcctgct 260
Query: 61 agagaagagacctcagtagtttgagtgaagcctgggaggttaagagagttggttgagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagaagagacctcagtagtttgagtgaagcctgggaggttaagagagttggttgagaga 320
Query: 121 gtcttcggtctgtctagaccaccgtccttggcagtttgcaaagtaaagaggtccctgatg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 gtcttcggtctgtctagaccaccgtccttggcagtttacaaagtaaagaggtccctgatg 380
Query: 181 tttacctacaggcagcagaaacacccacttagtgcatacttctcagcagccttaagtctg 240
|||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 381 tttacctacaggcagcagaaacgcccacttagtgaatactgctcagcagccttaagtctg 440
Query: 241 agctgctgctattttt-----attgatccttttgttttcttcttatgtctaaagtctcgt 295
||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 agctgctgcta-----cccagattgatccttttgttttcttcttatgtctaaagtcacgt 495
Query: 296 gtgattgagacctttgtattgttgtttaaaatcttgcagtgcaatagtgtggttggtggc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtgattgagacctttgtattgttgtttaaaatcttgcagtgcaatagtgtggttggtggc 555
Query: 356 aattttaaagaagtttgtccagagaaggtaattcggttcataccaccattatac 409
||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 556 aattttaaagaagttagtccagagaaggtaattcggttcaaaccaccattatac 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
