Query= MSMg01no473_l24.b1 MSMg01no473_l24.b1 CHROMAT_FILE:
MSMg01no473_l24.b1 PHD_FILE: MSMg01no473_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:58 2005
(576 letters)
>mm_chr3_53661010_53661985
Length = 976
Score = 1085 bits (561), Expect = 0.0
Identities = 570/573 (99%)
Strand = Plus / Plus
Query: 4 ggaattcataatatacttaccggtgcttctgtggtactgtcagttcccaccatgacatac 63
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcataatatacctaagggtgcttctgtggtactgtcagttcccaccatgacatac 263
Query: 64 tggattcacaagatctctactatcgaaactatttgacgtacaatagcaacttatactcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggattcacaagatctctactatcgaaactatttgacgtacaatagcaacttatactcat 323
Query: 124 aatggttagatcctataatttaatgtttggctttgtataaatttaactgttcattcaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatggttagatcctataatttaatgtttggctttgtataaatttaactgttcattcaaat 383
Query: 184 acctattaagttcatcacaaattatataatttaaaaatctaactaggagatgctgtcaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acctattaagttcatcacaaattatataatttaaaaatctaactaggagatgctgtcaag 443
Query: 244 tcaaatacctctatgatcaattatccttttaaatttcaaaattaaaaactacatccaatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaaatacctctatgatcaattatccttttaaatttcaaaattaaaaactacatccaatt 503
Query: 304 ctgtgaatttgaatttccaaatgctcctgaaaagagttagcactcatcctcccattttgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgtgaatttgaatttccaaatgctcctgaaaagagttagcactcatcctcccattttgc 563
Query: 364 tgtttttgttttaaagcacagtccatttgtctcagaggtactctcttctcccggtgaggc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtttttgttttaaagcacagtccatttgtctcagaggtactctcttctcccggtgaggc 623
Query: 424 agcagtcaccacagtgtgacctgtggtgtcgtaccctccactcaaaggcattctctcttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agcagtcaccacagtgtgacctgtggtgtcgtaccctccactcaaaggcattctctcttt 683
Query: 484 ccatgaaaaaaatgaacaggaagggacaagcggccgctttccctgttctgttgattcttg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccatgaaaaaaatgaacaggaagggacaagcggccgctttccctgttctgttgattcttg 743
Query: 544 gtgctttcattgtatggtgaatgcctgatttca 576
|||||||||||||||||||||||||||||||||
Sbjct: 744 gtgctttcattgtatggtgaatgcctgatttca 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_l24.g1 MSMg01no473_l24.g1 CHROMAT_FILE:
MSMg01no473_l24.g1 PHD_FILE: MSMg01no473_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:58 2005
(538 letters)
>mm_chr3_53839218_53840155
Length = 938
Score = 717 bits (371), Expect = 0.0
Identities = 394/409 (96%), Gaps = 12/409 (2%)
Strand = Plus / Minus
Query: 130 acaatgggctgggccctctcacatcagtcattaatcaagagagtgccctatagatctgtt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 acaatgggctgggccctctcacatcagtcattaatcaagagagtgccctatagatctgtt 879
Query: 190 tcaaagccaaatcaatgaaggtgatttctcagcagaggttcccaattcctagatgaccct 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tcaaagccaaatcaatgaaggtgatttctcagcagaggttcccaattcctagatgaccct 819
Query: 250 cgcttgtaccacgctgagaagaaataacccacagcataacagtcacagaggaggtatgtt 309
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 818 cgcttgtaccacgctgagaagaaataacccacagcataacagtcacacaggaggtatgtt 759
Query: 310 gcatacagacagctttgacatttgaacttaggtctgaacacatacttcattattttaaaa 369
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 758 gcatacagacagctttgacat------------ctgaacacatacttcattattttaaaa 711
Query: 370 aacataatcctgagagaaattgtaccacaggcctcaatctgtgtgcacttgggtatttat 429
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 710 aacataatcctgagagaaattgtggcacaggcctcaatctgtgtgcacttgggtatttat 651
Query: 430 caacaccaggctttcacttcctttgctgaaaccatccatctcaatgtcatttctggacgt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 caacaccaggctttcacttcctttgctgaaaccatccatctcaatgtcatttctggacgt 591
Query: 490 gatggtttaaagcactattttcaatacttatgcactttgttatttatca 538
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gatggtttaaagcactattttcaatacttatgcactttgttatttatca 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
