Query= MSMg01no474_o22.b1 MSMg01no474_o22.b1 CHROMAT_FILE:
MSMg01no474_o22.b1 PHD_FILE: MSMg01no474_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:33 2005
(525 letters)
>mm_chr3_15002708_15003632
Length = 925
Score = 969 bits (501), Expect = 0.0
Identities = 516/521 (99%)
Strand = Plus / Plus
Query: 5 gaattccaccccaattctctcatttcctgaatcagtggattctctatgtggactccggtc 64
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaccccaaatctttcatttcctgaatcagtggattctctatgtggactccggtc 264
Query: 65 cttgcccactaaaatgtacaaagcaaattgtaggaaagagaattgcaatgcttttatcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttgcccactaaaatgtacaaagcaaattgtaggaaagagaattgcaatgcttttatcct 324
Query: 125 atttatcttctcctggagttaataacaaggtatttagtaaacaggatgagtggaatgcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttatcttctcctggagttaataacaaggtatttagtaaacaggatgagtggaatgcct 384
Query: 185 ccaggtctggaactaatttctgctgtgaggatggtgacacttcataaggacatgttggga 244
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 ccaggtctggaactaatttctgctgtgaggatggtgacactccataaggacatgttggga 444
Query: 245 ggtcctgcacatagctctgtgtaccagtagtctttcctcaaggtcagacttccctttcta 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 ggtcctgcacatagctctgtgtaccagtagtcattcctcaaggtcagacttccctttcta 504
Query: 305 gctgactttccttcccatgccaggccgtgctgcctcatctggattactgtattctagctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctgactttccttcccatgccaggccgtgctgcctcatctggattactgtattctagctg 564
Query: 365 ctgagtctgaagtaatttcagttacagctcctgtgtcagcaacgtcccattctgagtgac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgagtctgaagtaatttcagttacagctcctgtgtcagcaacgtcccattctgagtgac 624
Query: 425 tgagatctgactttttcctttagaatcatatttccagccctctacccctccaagcctggg 484
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 625 tgagatctgactttttcctttagaatcatatttccagccctctatccctccaagcctggg 684
Query: 485 acttcttatgaattactaacatgcagactaagtttctcgga 525
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acttcttatgaattactaacatgcagactaagtttctcgga 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_o22.g1 MSMg01no474_o22.g1 CHROMAT_FILE:
MSMg01no474_o22.g1 PHD_FILE: MSMg01no474_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:33 2005
(453 letters)
>mm_chr3_15185530_15186382
Length = 853
Score = 658 bits (340), Expect = 0.0
Identities = 361/370 (97%), Gaps = 5/370 (1%)
Strand = Plus / Minus
Query: 1 agtacaatttttgagtacttactgtgtgtcattgtgtagaatttggatttaactgtgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agtacaatttttgagtacttactgtgtgtcattgtgtagaatttggatttaactgtgttt 311
Query: 61 gttggcacctgtctgtagccctagaatttgagaagattacaagtttgagtcaagcctagg 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gttggcacctgtctgtaaccctagaatttgagaagattacaagtttgagtcaagcctagg 251
Query: 121 ctacctaccatcactctgagatttaaaactgaagaaaaagtttgtattttttttt-ctct 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 250 ctacctaccatcactctgagatttaaaactgaagaaaaagtttgcattttttttttctct 191
Query: 180 gagggatatgagaattcactaaggaccgttaaaagagagtaaaatggtcaacattcatct 239
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 190 gagggatatgagaatccactaaggaccgttaaaagagagtaaaatggtcaacattcattt 131
Query: 240 ttaaagactcactcttggatgttgcatggatgacaaactacaggaggtgggctgtggaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttaaagactcactcttggatgttgcatggatgacaaactacaggaggtgggctgtggaaa 71
Query: 300 cagatac----ctgcaggcttctgagaaggttcacatggtaggggacagatgtcttggaa 355
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cagatactcacctgcaggcttctgagaaggttcacatggtaggggacagatgtcttggaa 11
Query: 356 tctggtgtcc 365
||||||||||
Sbjct: 10 tctggtgtcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
