Query= MSMg01no475_c15.b1 MSMg01no475_c15.b1 CHROMAT_FILE:
MSMg01no475_c15.b1 PHD_FILE: MSMg01no475_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(453 letters)
>mm_chr3_76856838_76857690
Length = 853
Score = 540 bits (279), Expect = e-157
Identities = 309/319 (96%), Gaps = 3/319 (0%)
Strand = Plus / Minus
Query: 1 tatctagggttttgcatgatcccaatgcctctgaggtccagagaacaggtttggtctctg 60
||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tatcttgggttctgcgtgatcccaatgcctctgaggtccagagaacaggtttggtctctt 258
Query: 61 gtagagcagaggacttcagatggagttttgcggagagtattgtgataagaagggagggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtagagcagaggacttcagatggagttttgcggagagtattgtgataagaagggagggct 198
Query: 121 tgctagtgtatgcaatggtgtcatcttttggaggctgattatgggatggatccctggata 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 197 tgctagtgtatgcaatggtgtcatcgtttggaggctgattatgggatggatccctggata 138
Query: 181 tggtagtctctagatggtccatccttttgtctcacctccaatctttgtctctgtaactcc 240
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 137 tggcagtctctagatggtccatcctttagtctcacctccaatctttgtctctgtaactcc 78
Query: 241 ttccatgggtgtatt-tttccaattctaagaaggggcaaagtgtccacactttagtcttc 299
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 77 ttccatgggtg-attgtttccaattctaagaaggggcaaagtgtccacactttagtc-tc 20
Query: 300 gttcttcttcagtttcatg 318
|||||||||||||||||||
Sbjct: 19 gttcttcttcagtttcatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_c15.g1 MSMg01no475_c15.g1 CHROMAT_FILE:
MSMg01no475_c15.g1 PHD_FILE: MSMg01no475_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(389 letters)
>mm_chr3_76670557_76671345
Length = 789
Score = 745 bits (385), Expect = 0.0
Identities = 388/389 (99%)
Strand = Plus / Plus
Query: 1 gacagccatttatgcacgatgtaggtaaacctgagggacattaacagctcagtgagcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacagccatttatgcacgatgtaggtaaacctgagggacattaacagctcagtgagcttt 260
Query: 61 tcctgactcttcagctgcccaatgtggaattgaatttctgttgtttacaagtcacacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctgactcttcagctgcccaatgtggaattgaatttctgttgtttacaagtcacacagt 320
Query: 121 ttgtaaattgtgctgtaccactgacagccgattcctcattatttgaaagtagtgtttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtaaattgtgctgtaccactgacagccgattcctcattatttgaaagtagtgtttcac 380
Query: 181 tttaagcctcaatttccttgtttacttagaaaagtagggaaatatttccaaattaacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaagcctcaatttccttgtttacttagaaaagtagggaaatatttccaaattaacaga 440
Query: 241 aatatgaatgtatgagtttaagtaaaattccttgaaatcaatgaatgcatactaaatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatatgaatgtatgagtttaagtaaaattccttgaaatcaatgaatgcatactaaatgct 500
Query: 301 tatagtatcaataaaataacccatgctaggcaaattgctgagctataacaaaggcctctt 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatagtatcaataaaatagcccatgctaggcaaattgctgagctataacaaaggcctctt 560
Query: 361 aattttcttctttctttatttttttaaga 389
|||||||||||||||||||||||||||||
Sbjct: 561 aattttcttctttctttatttttttaaga 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
