Query= MSMg01no475_g02.b1 MSMg01no475_g02.b1 CHROMAT_FILE:
MSMg01no475_g02.b1 PHD_FILE: MSMg01no475_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:08 2005
(250 letters)
>mm_chr3_118685272_118685926
Length = 655
Score = 418 bits (216), Expect = e-121
Identities = 240/250 (96%), Gaps = 5/250 (2%)
Strand = Plus / Minus
Query: 1 ccagttcctccacttgctcaggcagagctcagtaagaaaagaagaggcaaggagatataa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccagttcctccacttactcaggcagagctcagtaagaaaagaagaggcaaggagatataa 391
Query: 61 agattaacagtaaggctaagtactgaatatcttggggttagcaacagtatcctcattacc 120
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 390 agattaacagtaaggctaagtactgaatatcttggggttagccacagtatcctcatcacc 331
Query: 121 tggttttagtttactttattccttgtttctttttttttt---cttttttcattgcatcag 177
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 330 tagttttagtttactttattccttgtttctttttttttttttcttttttcattgcatcag 271
Query: 178 caagtacatgtcctgttatgtgctcttcctgtttgtaccatgtcctctcctctctgt--g 235
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 270 caagtacatgtcctcttatgtgctcttcctgtttgtaccatgtcctctcctctctgtatg 211
Query: 236 tatatatata 245
||||||||||
Sbjct: 210 tatatatata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 655
Length adjustment: 9
Effective length of query: 241
Effective length of database: 646
Effective search space: 155686
Effective search space used: 155686
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_g02.g1 MSMg01no475_g02.g1 CHROMAT_FILE:
MSMg01no475_g02.g1 PHD_FILE: MSMg01no475_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:08 2005
(324 letters)
>mm_chr3_118515982_118516706
Length = 725
Score = 598 bits (309), Expect = e-175
Identities = 321/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 1 caaattaaaagcataagaagtccggtactagaatactttgaaataattaaatggataatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaattaaaagcataagaagtccggtactagaatactttgaaataattaaatggataatt 260
Query: 61 acatctcgtgagttaagcagacagagataccttctatgtgaaagaactgatggcatttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatctcgtgagttaagcagacagagataccttctatgtgaaagaactgatggcatttca 320
Query: 121 cgtttttctttgatttctttctcttaagttcctttagaaagttagt-tttttgtgaagcc 179
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 321 cgtttttctttgatttctttctcttaagttcctttagaatgttagtgtttttgtgaagcc 380
Query: 180 gcatgtttaaatcagtgctctgggagaatgcaatgcatatgatgtgcagctaattcacgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 381 gcatgtttaaatcagtgctctgggagaatgcaatgcatatgatgtgcagctcattcatgt 440
Query: 240 ctatgttgtacattttcatgctgaaaaccaaatccttcgacgttttgttgtggtggtttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatgttgtacattttcatgctgaaaaccaaatccttcgacgttttgttgtggtggtttg 500
Query: 300 agaaatgtaattttatgttcaattt 324
|||||||||||||||||||||||||
Sbjct: 501 agaaatgtaattttatgttcaattt 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 725
Length adjustment: 9
Effective length of query: 315
Effective length of database: 716
Effective search space: 225540
Effective search space used: 225540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
