NNGGAAGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGG
ATCCGCGGAATTCACAATAGTGGCATCTTAAATTGTCTAGAAACACTTAA
AGAAATGTTCAAAGTCCTCAGTGATCAGAGAAATGCAAATTAAAACAACC
CTGAGATTCCACCTCACACCAATCAGAATGCAAAGATCAAAAACTCAGGT
GGCAGCAGAGGCTGGCAAGGATACGGAGAAAGAGGGACACTTTTCTATTG
CTGGTGGGATTGTCAGATGGTACAACTATTCTGGAGATTCCTCAGATAAT
TGGAAACAGATCTACCTGAAGACCCAGCTGTACTACTCTTGAGCATACAC
CCAAAAGATGTCCCACCATACCACAGAGGCCCATGCACCACTATATTCAT
AACAACCTTATCTGTGATAGGCAGAAGCTGGAAACAACCCAGATATCCAA
CAACGACAGAAGAATGGATACAGAAAAATGTGGTTCATTTACACAGTGGA
TACTATTCAGCTACTAAGAATGAGGACATCATAAGTTTTGCAGGCAAAGG
GATGGAACTAGAAAATATCAGCCTGAGTTACAGCTAGTAACTCAGACCCA
TTCTAAGTATGTATTAGTGAGTATGTACTCACTAATAAATGGATATTAGC
CAAAAACCTACAAAATATATAGGGTACAATTCACAGAACTCAAGAAGTAT
TTCAAGTATATC

NNNNCCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTGTACATGGGAAACA
AGGGGGAGATAGAGTTTGATTATTTTGTTCACTTAAGACTGCTTCCTGCA
TCACTTGTTTAAAAAACTGAATTGTCTTGGCATCTTTTTTGAAAATCAAT
TTACTGTAATGCTTACTTGACTTTTAGACTTTTAATTCTACTCAATTAAT
TAATATGGATATATTTATGTCAGTGCCAATCTAAAATAAGATGAAATTTA
CACAAGCATTTAGTAGCAATTGCTGGGCACATAATCATTAATTTGAAGAA
AATAATAAATTGCTGAAGTCTTTTTGCACTACCCGCTAGAGCAGCTCACT
TTCTGTGATTGCTTCTCCTTAATTAGTCTCAAGGTAGGCTCAAATTAAAC
TAATGTATCAGTGAAATTTCAAAATAATAAATGCTCTAGGACAGGAAAAT
TAGGTGTAAGAGTTTGATTTGTCCCTTTCTCAGCACAGAGAAGGTCTAAC
AATATTATTCAAACAGCATTGCATAGACTGGAATGGAAAAAGCCAGAAAA
TTACTATGTGCAAGAGATCTTCTAAGAAAGCAGTTGCCATAGCAACTGGA
GCCTCATAGACTGTACTGGATGAGATAGAATGTGTGTCAGCACAAAGAAA
TTTTTGGTTGTGTATCCTTTCCAAGAGAGACTGAACCCCTG

Query= MSMg01no477_j05.g1 MSMg01no477_j05.g1 CHROMAT_FILE:
MSMg01no477_j05.g1 PHD_FILE: MSMg01no477_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:03 2005
         (590 letters)



>mm_chr3_81633906_81634895
          Length = 990

 Score = 1133 bits (586), Expect = 0.0
 Identities = 589/590 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtgtacatgggaaacaagggggagatagagtttgattattttgttcacttaagactgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 cagtgtacatgggaaacaagggggagatagagtttgattattttgttcacttaagactgc 927

                                                                       
Query: 61  ttcctgcatcacttgtttaaaaaactgaattgtcttggcatcttttttgaaaatcaattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ttcctgcatcacttgtttaaaaaactgaattgtcttggcatcttttttgaaaatcaattt 867

                                                                       
Query: 121 actgtaatgcttacttgacttttagacttttaattctactcaattaattaatatggatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 actgtaatgcttacttgacttttagacttttaattctactcaattaattaatatggatat 807

                                                                       
Query: 181 atttatgtcagtgccaatctaaaataagatgaaatttacacaagcatttagtagcaattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 atttatgtcagtgccaatctaaaataagatgaaatttacacaagcatttagtagcaattg 747

                                                                       
Query: 241 ctgggcacataatcattaatttgaagaaaataataaattgctgaagtctttttgcactac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctgggcacataatcattaatttgaagaaaataataaattgctgaagtctttttgcactac 687

                                                                       
Query: 301 ccgctagagcagctcactttctgtgattgcttctccttaattagtctcaaggtaggctca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccgctagagcagctcactttctgtgattgcttctccttaattagtctcaaggtaggctca 627

                                                                       
Query: 361 aattaaactaatgtatcagtgaaatttcaaaataataaatgctctaggacaggaaaatta 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 626 aattaaactaatgtatcagtgaaatttcaaaataataaatgctccaggacaggaaaatta 567

                                                                       
Query: 421 ggtgtaagagtttgatttgtccctttctcagcacagagaaggtctaacaatattattcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ggtgtaagagtttgatttgtccctttctcagcacagagaaggtctaacaatattattcaa 507

                                                                       
Query: 481 acagcattgcatagactggaatggaaaaagccagaaaattactatgtgcaagagatcttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 acagcattgcatagactggaatggaaaaagccagaaaattactatgtgcaagagatcttc 447

                                                             
Query: 541 taagaaagcagttgccatagcaactggagcctcatagactgtactggatg 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 taagaaagcagttgccatagcaactggagcctcatagactgtactggatg 397


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)