Query= MSMg01no479_k06.b1 MSMg01no479_k06.b1 CHROMAT_FILE:
MSMg01no479_k06.b1 PHD_FILE: MSMg01no479_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:43 2005
(627 letters)
>mm_chr3_131850485_131851511
Length = 1027
Score = 1160 bits (600), Expect = 0.0
Identities = 618/624 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcatgtctcgtaatcacttcagtacactctgggatttcatttgaggcttaaaa 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcatgtgtagtaatcacttcagtacactctgggatttcatttgaggcttaaaa 263
Query: 64 atcaaccttagctatggagagattgggggaagctatacagaatgtgggtcagaagtattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcaaccttagctatggagagattgggggaagctatacagaatgtgggtcagaagtattt 323
Query: 124 cttcaactagtatgacatcactcaaaaggctgttttcatgttacaggaagagtgggtact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttcaactagtatgacatcactcaaaaggctgttttcatgttacaggaagagtgggtact 383
Query: 184 tgatacagaaagaagactcatggcaaacctactcagtttaacaacagaacaggccaaaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgatacagaaagaagactcatggcaaacctactcagtttaacaacagaacaggccaaaga 443
Query: 244 gattgaccacctaggagaaaggggcatatttatgtgatccaagaaaatactcaaacttgc 303
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 444 gattgaccacctaggagaaaggggcagaccaatgtgatccaagaaaatactcaaacttgc 503
Query: 304 agactttcctcatacagacaaagtcttagtacccttcaagaagccaaatgaatggagtgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agactttcctcatacagacaaagtcttagtacccttcaagaagccaaatgaatggagtgg 563
Query: 364 taaagaggactaaccaggaaacactggctacaaaggctggggtgataggacatccaatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaagaggactaaccaggaaacactggctacaaaggctggggtgataggacatccaatga 623
Query: 424 tgtaaggacttctgaatagtattgtttatggtccaatgtgtttttctgaatacggtggtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtaaggacttctgaatagtattgtttatggtccaatgtgtttttctgaatacggtggtt 683
Query: 484 gctaactcttctcaccttctagcaacaaggattgtttatgaggactcgtctgtaggaaac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gctaactcttctcaccttctagcaacaaggattgtttatgaggactcgtctgtaggaaac 743
Query: 544 aggcacagtgacaatgatagtaaccttacatttatggagaagcttgtattttgcctcata 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aggcacagtgacaatgatagtaaccttacatttatggagaagcttgtattttgcctcata 803
Query: 604 ttgttgccatgtgtccctgaggta 627
||||||||||||||||||||||||
Sbjct: 804 ttgttgccatgtgtccctgaggta 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_k06.g1 MSMg01no479_k06.g1 CHROMAT_FILE:
MSMg01no479_k06.g1 PHD_FILE: MSMg01no479_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:43 2005
(318 letters)
>mm_chr3_132015617_132016334
Length = 718
Score = 559 bits (289), Expect = e-164
Identities = 312/325 (96%), Gaps = 11/325 (3%)
Strand = Plus / Minus
Query: 1 gaaacacaacctgctttaa---ttttttttttaagtctaggctaaagctgggtgtagtgg 57
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaaacacaacctgctttaatttttttttttttaagtctaggctaaagctgggtgtagtgg 566
Query: 58 catgcacctaaaatcctagacactcagagcctg----ccccagaaggattgtgaactcaa 113
|||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 565 catgcacctaaaatcctagatactcagagcctgtggt----agaaggattgtgaactcaa 510
Query: 114 agccagccgggcttatacagtgaggtccctgtctcaagaataaataaaccagctaactaa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 agccagccgggcttatacagtgaggtccctgtctcaagaataaataaaccagctaactaa 450
Query: 174 gctaatagaaaccaattaatatgttaattatgttaatataggtaagatttaagtcacttt 233
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gctgatagaaaccaattaatatgttaattatgttaatataggtaagatttaagtcacttt 390
Query: 234 tatgaatttatctccagttatggttttgtttaattaaaattatttattacttatttgtgt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tatgaatttatctccagttatggttttgtttaattaaaattatttattacttatttgtgt 330
Query: 294 gtatgccagggtatttgtgtggagg 318
|||||||||||||||||||||||||
Sbjct: 329 gtatgccagggtatttgtgtggagg 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
