NAACTTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAGATGCG
CGGAATTCTCTGTNTTTTCTGTACCCCACTTTTTAATTTTTTTTTCTGGA
GGTTAACTTTTTGAGACCTTTATATATTTTGGATATCAGCCCTCTATTGG
ATATTTGCATAGTGAAGATATTTTTCCCAGTCTGTGGGTTGCTGATTTGT
CCTATTGAGTGTGTCTCTTTTTTTAGAGAAGCTTTCCAGTTTCAAGATGT
CCCATTTATCAATTGTTCTTAGAGCCTGTGCTGTTGGTATTCTGTTCAGG
AAATTTCCCCCTGTGCCAATGATTTTTAGGTTCTTTCCTACTTTCTCTTC
TATTAGATTCAGTGTATCTGGTTTTATTTTGAGGTCCTTGATTCACTTGG
ACTTGTGCTTTGTGAAAGGTGATAAATATGGATCTATTTTTATTTTTCTA
CATACAGACAGCCAGCTAAACCAGGACCATTTATTTTTCCCCACTGTATG
GTTTTGCCTTCTTTGTGGATCAAGTGTCCATAAGTATGTGGGTTATTTTT
TGGGTTTCAGATTCTATCCCATTGATCTGTACCTATACTATGCAGTCTTT
ATCACTATTGTTTTGTAGTAAAGCTTCAGGTCAGGAATGGTGATTCCCCC
AGAAGATCTTTTATTGGTATGATTTTTTGTTTATCCTGGAATTTGTTGTT
TTCCATATGAAATTGAGAATT

NACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGACAAAGGGTGA
ACTATAGAAGGTTTCAGAAAATCGAGTTAATGTGATAAAGTAAAAAAATA
TATAATCACATGGAGAGAAAAGGATGACATAGGGTTGAGTTATTCATGAT
CAAGCAAGTCATCTAGATCAAGACGCAGAAAAGGAATCTATGCAAAAGAC
AATGTCAATATCTCAAGATCCCCCCCCCCAAAAGTGCATGGTTGGTAGTA
AATACAAATTAACTCTTCACGAACTCATGACAAACTCAGCAATACAATAA
AAAAATCCATAATGACAGCTTCTCTTTGAGGAGTATAAAAAGGTAAACTT
AATGGGAGACTTAAAAAAATCTGTAAAAGCAACATTGAAATCTACAGAGT
CTCAGAAATAGACCCAAAAGGTCAAAGTATATACGGCAGGACACCTTGTC
TATGAACTGGAAGACATTGGCTTTCTCAAATCAATCCTTAATGTAGGTAC
AACTGCAATAAATACTCTGCATCTTTTTCTATAGAAATCAAGAAGGAGAC
TGTGAAATCTATTATCTATATACAAAGGGCATTAAACAGTTGGAACAGTT
TGAAAAAAGACAGTGAATGGCTTGTAGAGCTGATTTTAAGTCTTAGTGCA
AAGACTATCATCAAAAGGTTATCCCACCAGCACAAAGTCAGACATACAGA
TCTATGAAATGCAAAAGAGAT

Query= MSMg01no480_p19.g1 MSMg01no480_p19.g1 CHROMAT_FILE:
MSMg01no480_p19.g1 PHD_FILE: MSMg01no480_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:27 2005
         (518 letters)



>mm_chr3_26137862_26138790
          Length = 929

 Score =  843 bits (436), Expect = 0.0
 Identities = 503/530 (94%), Gaps = 13/530 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttaatgtgataaagtaaaaaaata---tataatcacatggagagaaaaggatgacatag 57
           ||||||||||||||||||||||| |   ||||||||||||||||||||||||||||| ||
Sbjct: 201 gttaatgtgataaagtaaaaaaaaaaaatataatcacatggagagaaaaggatgacaaag 260

                                                                       
Query: 58  ggttgagttattcatgatcaagcaagtcatctagatcaagacgcagaaaaggaatctatg 117
           |||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||
Sbjct: 261 ggttgagttattcatgatcatgcaaatcatctagattaagaagcagaaaaggaatctatg 320

                                                                       
Query: 118 caaaagacaatgtcaatatctcaagatcccc-ccccccaaaa--gtgcatggttggtagt 174
           |||||||||||||||||||||||||| |||| ||||||||||  |||||| |||||||||
Sbjct: 321 caaaagacaatgtcaatatctcaaga-ccccgccccccaaaaaagtgcattgttggtagt 379

                                                                       
Query: 175 aaatacaaattaactcttcacgaactcatgacaaactcagcaatacaataaaaaaa---- 230
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
Sbjct: 380 aaatacaaattaactcttcatgaactcatgacaaactcagcaatacaataaaaaaaaaaa 439

                                                                       
Query: 231 -tccataatgacagcttctctttgaggagtataaaaaggtaaacttaatgggagacttaa 289
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atccataatgacagcttcactttgaggagtataaaaaggtaaacttaatgggagacttaa 499

                                                                       
Query: 290 aaaaa-tctgtaaaagcaacattgaaatctacagagtctcagaaatagacccaaaaggtc 348
           ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 500 aaaaaatctgtaaaagcaacattgaaatctacagagtcacagaaatagactcaaaaggtc 559

                                                                       
Query: 349 aaagtatatacggcaggacaccttgtctatgaactggaagacattggctttctcaaatca 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaagtatatacggcaggacaccttgtctatgaactggaagacattggctttctcaaatca 619

                                                                       
Query: 409 atccttaatgtaggtacaactgcaataaatactctgcatctttttctatagaaatcaaga 468
           ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 620 atccttaatgtaggtacaactgcaataaagactctgcatcttttcctatagaaatcgaga 679

                                                             
Query: 469 aggagactgtgaaatctattatctatatacaaagggcattaaacagttgg 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aggagactgtgaaatctattatctatatacaaagggcattaaacagttgg 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 929
Length adjustment: 10
Effective length of query: 508
Effective length of database: 919
Effective search space:   466852
Effective search space used:   466852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)