Query= MSMg01no481_a01.b1 MSMg01no481_a01.b1 CHROMAT_FILE:
MSMg01no481_a01.b1 PHD_FILE: MSMg01no481_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:29 2005
(549 letters)
>mm_chr3_75518367_75519312
Length = 946
Score = 516 bits (267), Expect = e-150
Identities = 298/313 (95%), Gaps = 11/313 (3%)
Strand = Plus / Plus
Query: 1 atttatatattggccaaggatatctataaggaataagttcactttttataaccctatgtc 60
||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||
Sbjct: 201 atttatatattggccaaggatatttataaggagtaagttcactttttataaacctatgtc 260
Query: 61 actatcatatatttaaagtaactggtcaaatgcaagcaatttgcaattcaagaaaacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actatcatatatttaaagtaactggtcaaatgcaagcaatttgcaattcaagaaaacaag 320
Query: 121 tttggctacttagaataataatctccctgactctaaaggctttgcaggagtggcttctgt 180
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 tttggctacttagaataataatctccctgactctaaaggctttt-aggagtggcttctgt 379
Query: 181 gtcacaatttttatcagtaggtggcggagaggcgagaggctatgtcttagcttagtgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtcacaatttttatcagtaggtggcggagaggcgagaggctatgtcttagcttagtgctc 439
Query: 241 ttagtg--ctattaagaacatctgaatgattagtggctttataatccctgaaaaaaaaaa 298
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 t----gacctattaagaacatctgaatgattagtggctttataatccctgaaaaaaaaaa 495
Query: 299 aaaacctgagatg 311
|||||||||
Sbjct: 496 ----cctgagatg 504
Score = 176 bits (91), Expect = 3e-48
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 304 ctgagatgacctccatgcccgggccaggcaggtcagcatgggctaccaggacaggagcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 852 ctgagatgacctccatgcccgggccaggcaggtcagcatgggctaccaggacaggagtaa 911
Query: 364 gctggaaccaagaagaactctgtctgggaccttgg 398
|||||||||||||||||||||||||||||||||||
Sbjct: 912 gctggaaccaagaagaactctgtctgggaccttgg 946
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 549
Length of database: 946
Length adjustment: 10
Effective length of query: 539
Effective length of database: 936
Effective search space: 504504
Effective search space used: 504504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_a01.g1 MSMg01no481_a01.g1 CHROMAT_FILE:
MSMg01no481_a01.g1 PHD_FILE: MSMg01no481_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:29 2005
(550 letters)
>mm_chr3_75668912_75669861
Length = 950
Score = 549 bits (284), Expect = e-160
Identities = 315/332 (94%), Gaps = 11/332 (3%)
Strand = Plus / Minus
Query: 1 aatcattaccaagctgttgtatgatcttgactgaatagtggagacatcaaggtcattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aatcattaccaagctgttgtatgatcttgactgaatagtggagacatcaaggtcattgtt 603
Query: 61 tgggacagtaagtgtgcaggtctgccctgtccttcatcaagggctctatgaaattcattg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 602 tgggacagtaagtgtgcaggtctgccctgcccttcatcaagggctctatgaaactcattg 543
Query: 121 taagctataa-----------atgatctgtcatgaaggaacaaagtattccatcactaat 169
|||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 542 taagctataagaagctaaagcatgatctgtcatgaaggaacaaagcattccatcactaat 483
Query: 170 gctggcagacaacatataactgcatatcgttgtgcataaataatttgtttaaggaattgt 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gctggcagacaacatataactgcatatcgttgtgcataaataatttgtttaaggaattgt 423
Query: 230 ttatttagatgtctaaataatatatttaaatagcgcgttgaagaagctcattttagataa 289
||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 422 ttacttagaggtctaaataatatatttaaatagtgcgttgaagaagctcattttagataa 363
Query: 290 attaaaaacacatatgtataaaaagaaacagt 321
||||||||||||||||||||||||||||||||
Sbjct: 362 attaaaaacacatatgtataaaaagaaacagt 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
