ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCACCTATGTGGTCAGGAACCCATGGGGACTATAACCAGGTTGGGAAT
AGGATCGGTGTGACAGACAGACAAGCACTCGGTGGTGAAGCTCCTGCAAA
AATCTTTACTTTAGGGTTCAGATTATATTCGCAATCAAGAAGGAACAATT
TTCTCTTGGCAAATCACACATCTTAGTTCTCTTTTAAGTCTAACACAAAT
ATAGCTTACTAGGAAATTTGGGCTGGAAGTTGATTTTATTAGATATTAGA
ATGGCTACTCCAGCTTGTTTCTTCAGACCATTTGCTTGCAAAATTGTTTT
CCAGCCTTTCATTCTGAGGTAGTGTCTGTCTTTTTCCCTGAGATGGATTT
TCTGTAAGCAGCAAAATGTTGGGGTCCTGTTTTGTGTAACCAGGCTGTTA
GGCTATGTCTTTTTAATTGGGAAATTGGGTCCCCTTGATATTTAAGAGAA
TATTAAGGGAAAAGGAAATTGGTAACTTCCCGAACCATTTTTTGGGGGGT
AAAAAAGTGGGAATTCCGGGGGCCCTGGGGGGGGGGCCTTAATTTTAGGG
TTTGGTTGGAAAAAGAATAACTTTTCCTGGGTTTTTTCCAAAGGGAAAGG
GGTCGCCCCCCCCCCGGGGAAGGGGGTGTTTTTTTTTTTTTTTTTTCCAA
AGAAAAAAACCCCCTTTTGGAGGGGGGGG

TCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATGAATTAAAAATTCCTAGATGT
TCATATGCTGAAATAAAACATTAATTAAATAGTTTGTTAACTAACACACT
ACAATGTATCTGGCATATATAAAGTCTTATATAAAATGTAGTGTGGCGTG
AAGAAAGTTATTCTGGACAGAGCACTATTATTTCTAATTAACCAGCCTTG
GCACATAAAATCCCAGGAAAACCATTGAAAGCATTAATAGAAACAATAAA
TCTTCACCCAAAGGGCTATTACAGATCTTATTTTTTAAGTAGTACTTAGT
TACTGGGGAACGGGGGAGAAAAAAAAAAAGCAGGAAGTGTAATTGTATTT
AGTGTCACTTCCGGCACTACAAAACGTTACAAATATATAGCTCATTGTAA
TGTTCTTTAATTGGCACCACCCCAAGAAGGGAGTTATTGTTCTACACTAA
TATCACATGTTAAGCCATGTTTCAATCAGCTGACTACTTTGTTCCACACG
CATAAATACAAACTACATTTGTGTTTTAACTGCCTTACTTTTAGTGGTAG
TTTTTAAATAGCAAATCATATAACACTAGCAATAACTGCACAAATAATTT
CCTTCTCGGGCTTTTGTAAGAAACCAGATCGAGACACGCCTTCCAATCAG
AGCGCTGCTGTAAGATTACATACTTGTTAGGAGTTN

Query= MSMg01no481_j04.g1 MSMg01no481_j04.g1 CHROMAT_FILE:
MSMg01no481_j04.g1 PHD_FILE: MSMg01no481_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:15 2005
         (594 letters)



>mm_chr3_16084271_16085264
          Length = 994

 Score = 1089 bits (563), Expect = 0.0
 Identities = 587/595 (98%), Gaps = 2/595 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatgaattaaaaattcctagatgttcatatgctgaaataaaacattaatt-aaatagttt 59
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 794 tatgaattaaaaattcctagatgttcatatgctgaaataaaacattaattaaaatagttt 735

                                                                       
Query: 60  gttaactaacacactacaatgtatctggcatatataaagtcttatataaaatgtagtgtg 119
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 734 gttaactaacacactacaatgtatctggcatatataaactcttatataaaatgtagtgtg 675

                                                                       
Query: 120 gcgtgaagaaagttattctggacagagcactattatttctaattaaccagccttggcaca 179
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcatgaagaaagttattctggacagagcactattatttctaattaaccagccttggcaca 615

                                                                       
Query: 180 taaaatcccaggaaaaccattgaaagcattaatagaaacaataaatcttcacccaaaggg 239
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 614 taaaatcccaggaaaaccattgaaagcatcaatagaaacaataaatcttcacctaaaggg 555

                                                                       
Query: 240 ctattacagatcttattttttaagtagtacttagttactggggaacgggggagaaaaaaa 299
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 554 ctattacagatcttattttttaagtagtacttagttactggggaacggggaag-aaaaaa 496

                                                                       
Query: 300 aaaagcaggaagtgtaattgtatttagtgtcacttccggcactacaaaacgttacaaata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaaagcaggaagtgtaattgtatttagtgtcacttccggcactacaaaacgttacaaata 436

                                                                       
Query: 360 tatagctcattgtaatgttctttaattggcaccaccccaagaagggagttattgttctac 419
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 435 tatagctcattgtaatgttctttaattggcaccaccccaagaaaggagttattgttctac 376

                                                                       
Query: 420 actaatatcacatgttaagccatgtttcaatcagctgactactttgttccacacgcataa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 actaatatcacatgttaagccatgtttcaatcagctgactactttgttccacacgcataa 316

                                                                       
Query: 480 atacaaactacatttgtgttttaactgccttacttttagtggtagtttttaaatagcaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atacaaactacatttgtgttttaactgccttacttttagtggtagtttttaaatagcaaa 256

                                                                  
Query: 540 tcatataacactagcaataactgcacaaataatttccttctcgggcttttgtaag 594
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tcatataacactagcaataactgcacaaataatttccttctcgggcttttgtaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)