Query= MSMg01no481_p19.b1 MSMg01no481_p19.b1 CHROMAT_FILE:
MSMg01no481_p19.b1 PHD_FILE: MSMg01no481_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:48 2005
(599 letters)
>mm_chr3_56650781_56651779
Length = 999
Score = 559 bits (289), Expect = e-163
Identities = 313/321 (97%)
Strand = Plus / Minus
Query: 279 ttcattttgtcccatgtccttggatatactatcatgaaaggtatagtgtatagtagagga 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 999 ttcattttgtcccatgtccttggatagactatcatgaaaggtatagtgtatagtagagga 940
Query: 339 gatctggttacttcccagcctggcagtcaacagtgtacaatagcaaatagccagggatta 398
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 gatctggttacttcccggcctggcagtcaacagtgtacaatagcaaatagccagggatta 880
Query: 399 atatgctcctgaggaccaccctacgcactgacccacttcctctaactgggatccacttcc 458
|||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 879 atatgctcctgaggaccaccctacccactgacacacttcctctaactgggatctacttcc 820
Query: 459 taaactttccacaatcaaactaacaataccatatggaaccagggtttccaagcattggaa 518
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 819 taaactttccacaatcaaaataacaataccaaatggaaccagggtttccaagcattggaa 760
Query: 519 acataatgggctggggtggattccatattaagtccttagcatattatcactttgttttaa 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 acataatgggctggggtggattccatattaagtccttagcatattatcactttgttttaa 700
Query: 579 agaagcaagaactgagtcaca 599
||||||||||||||| |||||
Sbjct: 699 agaagcaagaactgactcaca 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_p19.g1 MSMg01no481_p19.g1 CHROMAT_FILE:
MSMg01no481_p19.g1 PHD_FILE: MSMg01no481_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:48 2005
(612 letters)
>mm_chr3_56511825_56512837
Length = 1013
Score = 1154 bits (597), Expect = 0.0
Identities = 609/613 (99%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 1 atgtttaagcatcagactgcctttaaaaac-ttcaaaatgcatgcagctttgctattttc 59
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 atgtttaagcatcagactgcctttaaaaacattcaaaatgcatgcagctttgctattttc 260
Query: 60 ctgcacaaaggctcctctaagcctggagattattactgggtgaagtcgagtggtaaatct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcacaaaggctcctctaagcctggagattattactgggtgaagtcgagtggtaaatct 320
Query: 120 atcctcatctgaggtgtgttcagtctactgactggaatgctttggtggacatgattaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcctcatctgaggtgtgttcagtctactgactggaatgctttggtggacatgattaaaa 380
Query: 180 aaaagctccaactctgatctatttagctttcctttgtcttcagtgatgtatgaaatctct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagctccaactctgatctatttagctttcctttgtcttcagtgatgtatgaaatctct 440
Query: 240 tttaggatattatacattttcttcaaaatttatctcctcttgtcaaccaaaggacactcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaggatattatacattttcttcaaaatttatctcctcttgtcaaccaaaggacactcc 500
Query: 300 cttccattatactttttatgagagccaaaacatgacatgcagcttcaattaacaaatgcc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttccattatactttttatgagagccaaaacatgacatgcagcttcaattaacaaatgcc 560
Query: 360 aaaaaacatgtgtcagacatctgtctctgtaaaccatggtagctggttctgaaacatccc 419
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaaacatgtgtcggacatctgtctctgtaaaccatggtagctggttctgaaacatccc 620
Query: 420 tgggaattgctgcagagaaatagggcacattttctgacatttggcctaaataatgtggct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgggaattgctgcagagaaatagggcacattttctgacatttggcctaaataatgtggct 680
Query: 480 ttgttagcaagaaaagaaaaattctactcaagaccttggcttgaatttgggtcataacta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgttagcaagaaaagaaaaattctactcaagaccttggcttgaatttgggtcataacta 740
Query: 540 ttaagttaggtgtaactgtctgattacattttgaaaaacagctccatcaaaatgcatttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 741 ttaagttaggtgtaactgtctgattacattttgaaaaacagctccatcaaaatacatttt 800
Query: 600 agaaggctgattc 612
|||||||||||||
Sbjct: 801 agaaggctgattc 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1013
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1003
Effective search space: 603806
Effective search space used: 603806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
