Query= MSMg01no483_l11.b1 MSMg01no483_l11.b1 CHROMAT_FILE:
MSMg01no483_l11.b1 PHD_FILE: MSMg01no483_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:01 2005
(673 letters)
>mm_chr3_149374903_149375976
Length = 1074
Score = 1226 bits (634), Expect = 0.0
Identities = 664/674 (98%), Gaps = 1/674 (0%)
Strand = Plus / Minus
Query: 1 cagaaacaactgcatcctgggtttacatgaccatagtcaaatgaagaaaactcaattggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 cagaaacaactgcatcctgggtttacatgaccatagtcaaatgaagaaaactcaattggc 815
Query: 61 cttctgtaatctctaccatccctagtaacttccaatttcattattttgtgtctcctatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 cttctgtaatctctaccatccctagtaacttccaatttcattattttgtgtctcctatat 755
Query: 121 gaaatcacaatatttatgtgtctactaattctgtctgttattccccgctattattaataa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 754 gaaatcacaatatttatgtgtctactaattctgtctgttattccccactattattaataa 695
Query: 181 attacttctaactggggaaacttaggcttctagcaaatattttgccaatgtaggtggaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 attacttctaactggggaaacttaggcttctagcaaatattttgccaatgtaggtggaca 635
Query: 241 agcttttattgtcataatgtgggtgaaagtccaacaaaattagtgggcagaagtcaactg 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 agcttttatagtcataatgtgggtgaaagtccaacaaaattagtgggcagaagtcaactg 575
Query: 301 ttcattgaccattctacagat-aaccagattatccccacacccaacaattatctagctta 359
||||||||||||||| ||||| ||||||||||||||||| | || ||||||||||||||
Sbjct: 574 ttcattgaccattctgcagatggaccagattatccccacagctaagaattatctagctta 515
Query: 360 ggagtcagtcgcactaatagaagccctgtagaaatccatgagaaggacacgactgtgtgt 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 514 ggagtcagtcgcactaatagaagccctgtagaaatccatgagaaggacactactgtgtgt 455
Query: 420 gtgttcactctccaagggtgaaagcatagtctacaggaaagtagcttgctgcctatatct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gtgttcactctccaagggtgaaagcatagtctacaggaaagtagcttgctgcctatatct 395
Query: 480 tccaaatgtacttgctggagcaaagatggggggagtcactcagagagaagcaggaagcac 539
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tccaaatgtacttactggagcaaagatggggggagtcactcagagagaagcaggaagcac 335
Query: 540 agcagggctcctgaagtgtgagctccctccttcccatgcaccacagctagggcagggaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agcagggctcctgaagtgtgagctccctccttcccatgcaccacagctagggcagggaat 275
Query: 600 ttagtggagacatgcagcactgaaattaagtatgaactacctgcattcttttcttctacc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttagtggagacatgcagcactgaaattaagtatgaactacctgcattcttttcttctacc 215
Query: 660 tgctttaacctcta 673
||||||||||||||
Sbjct: 214 tgctttaacctcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_l11.g1 MSMg01no483_l11.g1 CHROMAT_FILE:
MSMg01no483_l11.g1 PHD_FILE: MSMg01no483_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:01 2005
(651 letters)
>mm_chr3_149207034_149208084
Length = 1051
Score = 1174 bits (607), Expect = 0.0
Identities = 640/651 (98%)
Strand = Plus / Plus
Query: 1 tctgtgcatcaaaaaacaaaaacaaaaacccctctgaaacccaaaccaaactaaaccact 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tctgtgcatcaaaaaacaaaaacaaaaacccctccgaaacccaaaccaaactaaaccact 260
Query: 61 accaccaccaccaccaccaccacggacatgatcttatggatatcagtgaggtaactgcat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaccaccaccaccaccaccacggacatgatcttatggatatcagtgaggtaactgcat 320
Query: 121 ggtgtagaggaggggtaggacagacagcaggacagagctcagacaagccccaggaagggc 180
|||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 321 ggtgtagaggaggggtaggaaagacagcaggacagagctcagaccagctccaggaagggc 380
Query: 181 cctgagaaacaagggctgtgagaaatcaactttctagaatgttctccagaacacttccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgagaaacaagggctgtgagaaatcaactttctagaatgttctccagaacacttccct 440
Query: 241 gttgcaccactgggttctttgaagagtgggttgggcgagtgaagcggctgttcctttaca 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 gttgcaccactgggttctttgaagagtgggttgggcgattgaagcggctgttcctttaca 500
Query: 301 gctggcgggttcacagcggtgctacttcatttatggctcttgtttgtaaattacaagtac 360
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctggcgggttcacagaggtgctgcttcatttatggctcttgtttgtaaattacaagtac 560
Query: 361 cttttaaggagagtgacttccttaagtctttagagttcttatcagtcgctaatattaaga 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttttaaggagagtgatttccttaagtctttagagttcttatcagtcgctaatattaaga 620
Query: 421 tctattttagacttcatgggaaagtatctgctttttgataagctctttgcgaataaagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctattttagacttcatgggaaagtatctgctttttgataagctctttgcgaataaagat 680
Query: 481 aggaaagagagcaagctagcctctctttgtaagcttgcgaagcacacataaaaggaccga 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 aggaaagagagcaagctatcctctctttgtaagcttgcgaagcacacataaaaggactga 740
Query: 541 gctggtgagatggctcagtgtttaagaccatggaagctctcatggaggacctgggtttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctggtgagatggctcagtgtttaagaccatggaagctctcatggaggacctgggtttgt 800
Query: 601 tttctagcacctaaatatctgctcataaccatctgtaactacatttcccgg 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttctagcacctaaatatctgctcataaccatctgtaactacatttcccgg 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
