NNNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCATGGGTACGCTTCAGGAAACCTTTCGAGGTTCTCAATA
GAACCAAGGGAGCTCATGGAACTGGAAGACAGCTCTCTGAGGCAAGCTGT
TGGGTTTGATAGCCACAAAGGTCATATGATGTCTACAGAGGACTAGGGGT
GTGTCAAAATCAGCTAGAAACTGGTGTTGCTTGCAAAGTAGAAGGATGAT
CTAGAGAAGGAGATAGAAGAGATCCAGGCTAGGATCAGGTAAGACCATGG
CAGTGGGGATGGGAAGGACATAATATTCAGAGACAAGCTACCGAGCCTTT
TGTTGGGCCCTATTTGGCCTTGGTTTGGGCTCAATTTTTGAGACCCGTCA
TTCTCCTCCACTTGAGAATGACTCAGCACGACCTACCAACCTGATTGAGA
CTGCCTCTGCCTAGCTACTGCTGATGTAGGCCCCGTGAGATAACTCCGCA
CCCCTCATCATCTCACTCCATCACATATGTCATCTCACCCCATATCCCTA
CCCCCACCTCCTTGACTTCTCTACATAAGCAAGTATCTAGTTTAATAAAG
TGAGTTTCTGCTTTGACAACACTCCTGGCCCAGGTGTGTTTGTTTGGGGC
CATCAACACTCACCATCCCACTCAGCCTCAGAGAGGCTGAAGTGAGCTCT
CTCCTCTCGCCTGGACCTGCTAGCAGAGAGCCAACAGGCTTTTGAACTGA
TT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCAAGCCGATCCTGGGACTACCTAGGGCATTGATGAAGGCCAGG
AAGCAAAGTTCAATTTTGCTTAGGTTTTTGGCAAGTCATTGCTTGGAGTC
ACCTACAATAAAACAATACTGAAAGAGAGCACACAGATCCATTTGCAAGG
ACAAGTTTGGAGCATTGGATATTTGGGATGCCATGTTTCCAGGAGGCCAA
GTGTCCATGAACTTTTTGCCTCGGGACTGCTTCCAGGTTTCTAAACCTGT
CAAGCAAGTCACTACTGGAGTGGATGTAGTAGTCATGGTGTCTCTTTTAC
AGCAATGGAAATCCTAACCAAGACAAAGTCCTAAATCCCAGTACCTCAGA
ATGTGACTAATGTTCAGACAGCACATTTACAAGATAGCCGAGTTTAAGAG
AAATCATATGGGCAGATCTTAGTAGAGCTGGCATCTTTAGAAGAGGAGGA
AGAGACATCAAGAATGAAACAGACCAGTGAAGACAGTGAGAAGGTGGCCA
TCTGTAAGCCATGGAAAGAGGGCTCAAGAAAGCAGGCCTTCTCATGTATT
GACATTGGACTTCCAGCCTCCAGAACTGAAGAAGTGGAGGAGGAGGAAGA
GGAAGAGAAGGAGGAGGACTCTGTTGCTGAAACCAAGCAGTGTGTTATAC
TTGTCATGATAGTCCTAA

Query= MSMg01no484_c19.b1 MSMg01no484_c19.b1 CHROMAT_FILE:
MSMg01no484_c19.b1 PHD_FILE: MSMg01no484_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:38 2005
         (653 letters)



>mm_chr3_19792266_19793319
          Length = 1054

 Score = 1151 bits (595), Expect = 0.0
 Identities = 640/655 (97%), Gaps = 3/655 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggaaacctttcgaggttctcaatagaaccaagggagctcatggaactggaagacagctc 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaaaactttcgaggttctcaatagaaccaagggagctcatggaactggaagacagctc 260

                                                                       
Query: 61  tctgaggcaagctgttggg-tttgatagccacaaaggtcatatgatgtctacagaggact 119
           ||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| ||
Sbjct: 261 tctgaggcaagctgttgggttttgatagccacaaaggttatatggtgtctacagagggct 320

                                                                       
Query: 120 aggggtgtgtcaaaatcagctagaaactggtgttgcttgcaaagtagaaggatgatctag 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggggtgtgtcaaaatcagctagaaactggtgttgcttgcaaagtagaaggatgatctag 380

                                                                       
Query: 180 agaaggagatagaagagatccaggctaggatcaggtaagaccatggcagtggggatggga 239
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 agaaggagatagaagagatccaggctaggatcaggtaaggccatggcagtggggatggga 440

                                                                       
Query: 240 aggacataatattcagag-acaagctaccgagccttttgttgggccctatttggccttgg 298
           |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggacataatatacag-gcacaagctaccgagccttttgttgggccctatttggccttgg 499

                                                                       
Query: 299 tttgggctcaatttttgagacccgtcattctcctccacttgagaatgactcagcacgacc 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttgggctcaatttttgagacccgtcattctcctccacttgagaatgactcagcacgacc 559

                                                                       
Query: 359 taccaacctgattgagactgcctctgcctagctactgctgatgtaggccccgtgagataa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taccaacctgattgagactgcctctgcctagctactgctgatgtaggccccgtgagataa 619

                                                                       
Query: 419 ctccgcacccctcatcatctcactccatcacatatgtcatctcaccccatatccctaccc 478
           | || |||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccccacacccctcgtcatttcactccatcacatatgtcatctcaccccatatccctaccc 679

                                                                       
Query: 479 ccacctccttgacttctctacataagcaagtatctagtttaataaagtgagtttctgctt 538
           ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccacctccttgccttctctatataagcaagtatctagtttaataaagtgagtttctgctt 739

                                                                       
Query: 539 tgacaacactcctggcccaggtgtgtttgtttggggccatcaacactcaccatcccactc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgacaacactcctggcccaggtgtgtttgtttggggccatcaacactcaccatcccactc 799

                                                                  
Query: 599 agcctcagagaggctgaagtgagctctctcctctcgcctggacctgctagcagag 653
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 agcctcagagaggctgaagtgagctctctcctctcgcctggacctgctagcagag 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space:   671292
Effective search space used:   671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)