CGCCGCCGCTACGAGGGCCCACACAAGGATCTTTCCCAAAAAGGGTTTTT
GGTGACGGGCTCCTACCCGACTACTCTAATTTACATTTTTTAACCACGCT
CTGTGCTATTTATTCTGTACCTAAATAACCCCGTTTTTCCCGGGCGAGTG
ATGCTTCTTACTTTATAACATCATGTAAATTGTTTACCAAACCGCTTGTA
TGCGCCAAACCCCGTCCCAGCCGAATCCTTCCCGGCCTGGAGGGGCGCGG
GTGGAATGGTAAATGCCAAAATGAAAGAGTACCGAGATTTTTGTGTATAA
CCCGCCACCTTAAACCGTTCCCCTCCCGCCTATCCCCCGGGGGCGGCGGG
GGGGNNNTTCCCCTAATAAATTGCGGGGCCGGCTAAATACGAACTCACTA
ATCCCGANGAGGAAGCCGCGGNAATTCACCCAGTAGCTNAGTACTAGTGG
ACTCCCTAATCACTAAGTTAACTTTGGTGGACAATTTAGAAAGAACAATC
TGCAATCCAAGGTAAAAGGCCAATCCACGGTGGGGAAAGGAGGAATCCAA
GGGGCCCAGGTTGGCCCCAAAAGANGAGGGACCCTTAAAAAGAGAGGCGG
GGGCAAAAGGGCCCCCCCCCTCCAATTTCCAGAGCCCCGGCCGGGGGGTT
CACCCCCAAAACACCCCGGGGGGA

NNCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCCTGTCTTGATGTTTAA
ATAGGTCTTTCACTCATATTTAATAGGCTAAATTTTTGGAGAATATGCAT
TCACATAAAACATTCTAGGCCTAAATGTTCATCTTAGCATGTTAAAAGCA
GGGTTCACATTGTCACTGGTGCCCTGTCTCAGGATGGGGAAGTTGTGGCT
CGTGACATTAAATCCTAATTTCTATAATTCTGTTCTCTGGAAGAAACTGA
ATAAAGGAACTGTGGTTAAGAGCACACAACCCAGATGAATAAATTATAGC
CATAGTTACACCAGGAATAATGTGCAGGAATATATATGAGAGTCTCTACA
TCAACAATCAGAAGAAATTCAAAGTGCTATTAAATTTGTAACTTAGCGAG
CATTTAGATTTTCAGCATAGTCACACCTCACCAATAACATTTACGTAAAC
ATTCAAAAAAAACAATAACAACCTTCAAACACACTGAAATCTGAAACACT
TCTGGTCCTAAGCATTTGGGGCAAGAGAGATTCAAACTGTACACATAAAA
TAAGATTTTAGCTGTTTACACATACGTATGTGTCAGAATGATAATACAAA
AAACATCTAAGCTTACAGCATGCACACTCTCTCAATCACAGCACTGGCTG
TTTGCGTTGCTATGACTGAAGGAGAATATAATTAATAAGAAAGTAAA

Query= MSMg01no484_h04.g1 MSMg01no484_h04.g1 CHROMAT_FILE:
MSMg01no484_h04.g1 PHD_FILE: MSMg01no484_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:01 2005
         (666 letters)



>mm_chr3_58930616_58931681
          Length = 1066

 Score = 1230 bits (636), Expect = 0.0
 Identities = 648/652 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcctgtcttgatgtttaaataggtctttcactcatatttaataggctaaatttttggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctcctgtcttgatgtttaaataggtctttcactcatatttaataggctaaatttttggag 593

                                                                       
Query: 61  aatatgcattcacataaaacattctaggcctaaatgttcatcttagcatgttaaaagcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aatatgcattcacataaaacattctaggcctaaatgttcatcttagcatgttaaaagcag 533

                                                                       
Query: 121 ggttcacattgtcactggtgccctgtctcaggatggggaagttgtggctcgtgacattaa 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 532 ggttcacattgtcactggtgccctgtctcagtatggggaagttgtggctcgtgacattaa 473

                                                                       
Query: 181 atcctaatttctataattctgttctctggaagaaactgaataaaggaactgtggttaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 atcctaatttctataattctgttctctggaagaaactgaataaaggaactgtggttaaga 413

                                                                       
Query: 241 gcacacaacccagatgaataaattatagccatagttacaccaggaataatgtgcaggaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gcacacaacccagatgaataaattatagccatagttacaccaggaataatgtgcaggaat 353

                                                                       
Query: 301 atatatgagagtctctacatcaacaatcagaagaaattcaaagtgctattaaatttgtaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atatatgagagtctctacatcaacaatcagaagaaattcaaagtgctattaaatttgtaa 293

                                                                       
Query: 361 cttagcgagcatttagattttcagcatagtcacacctcaccaataacatttacgtaaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cttagcgagcatttagattttcagcatagtcacacctcaccaataacatttacgtaaaca 233

                                                                       
Query: 421 ttcaaaaaaaacaataacaaccttcaaacacactgaaatctgaaacacttctggtcctaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ttcaaaaaaaacaataacaaccttcaaacacactgaaatctgaaacacttctggtcctaa 173

                                                                       
Query: 481 gcatttggggcaagagagattcaaactgtacacataaaataagattttagctgtttacac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gcatttggggcaagagagattcaaactgtacacataaaataagattttagctgtttacac 113

                                                                       
Query: 541 atacgtatgtgtcagaatgataatacaaaaaacatctaagcttacagcatgcacactctc 600
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 112 atacgtatgtgtcagaatgataatacaaaaaacatcaaagcttacagcatgcacactctc 53

                                                               
Query: 601 tcaatcacagcactggctgtttgcgttgctatgactgaaggagaatataatt 652
           ||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 52  tcaatcacagcactggctgtttgtgttgctatgactgaaggaaaatataatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)