Query= MSMg01no485_j13.b1 MSMg01no485_j13.b1 CHROMAT_FILE:
MSMg01no485_j13.b1 PHD_FILE: MSMg01no485_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:36 2005
(241 letters)
>mm_chr3_67799371_67800011
Length = 641
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Minus
Query: 1 ttgcacacccacacaccacccacatcgcctgcctggaggtaacagcttttggcttttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgcacacccacacaccacccacatcgcctgcctggaggtaacagcttttggcttttgtt 381
Query: 61 ctggaccccatgccctttaagtgtttactcttatatttcttgttcatgttgaatgcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctggaccccatgccctttaagtgtttactcttatatttcttgttcatgttgaatgcattc 321
Query: 121 acatcatttcctaagctctctaatgatgtttttgccaattatgcttagagtggagaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acatcatttcctaagctctctaatgatgtttttgccaattatgcttagagtggagaaaga 261
Query: 181 atctctctcccgctgacctaagataggtgcagatgcttgtgtttcagtcaggtttatcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atctctctcccgctgacctaagataggtgcagatgcttgtgtttcagtcaggtttatcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no485_j13.g1 MSMg01no485_j13.g1 CHROMAT_FILE:
MSMg01no485_j13.g1 PHD_FILE: MSMg01no485_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:36 2005
(651 letters)
>mm_chr15_28476698_28477754
Length = 1057
Score = 368 bits (190), Expect = e-105
Identities = 224/238 (94%), Gaps = 6/238 (2%)
Strand = Plus / Plus
Query: 420 ttgaatggaaagcaatttgtctttggttttataaagctgaaagtacacagatatttactc 479
|||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 620 ttgaatggaaagcaatttgtctttggctttataaagctgaaagtacgcaggtatttactc 679
Query: 480 ctttatccagtgatttcatgtctaaacacttttt-----tt-ttgttcagtgtctttaaa 533
||| |||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 680 cttgatccagtgatttcatgtctaaacacttttttgttgttgttgttcagtgtctttaaa 739
Query: 534 agcatgctgcaatcatacaattttacatctgaacaaaacaatagtactcacaaaggaaaa 593
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 740 agcatgctgcaatcattcaattttacatctgaagaaaacaatagtactcacaaaggaaaa 799
Query: 594 cctaaaataatccaagtctttatcttcagggaaactgttacccacaatgcaatggtaa 651
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 800 cctaaaataatccaagcctttatcttcagggaagctgttacccacaatgcaatggtaa 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1057
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1047
Effective search space: 671127
Effective search space used: 671127
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
