GTGGGGGCGGGGTCAAGGGGGAGGGGCGACGACCAGCNANGGAGTTTTCA
AAAAGGAGGGGTGGGAGGTGTTGCGGTTTTCCCCCCGTCAACTGTGGATA
AGAGATAAAGAGAATGATTTCTGTGAAGACATTATTTCCGACGCCCGACC
CCTTTCTTATGCCAACGACAATTGTTTGTATCTTCTCGAAACTGCCCAGG
CATATCGACGCGTGTTGACCATACGGATACTCGACTTATAGTATTCTTGG
CCCACCAATCTGTGCCCTTGTACACATGATTATTCCTCACGTCTTGCACC
CATCATTTGGATTGTATTAAGGGTACGACCGTTAGACAATAGAACGCCGC
CGAGGAATATGATATTGAGTGGAGATATCTATGAGCGAACCGAGTGTCCT
ATCTAGGCTAAAACAGAATCAAGCTCCTTCAGACAATTTCTATCCGACTC
CGCCCCCCAAATTATTTTTTAGGTTTTAGATGCGCGTGCCCCGGGCAGTT
CAGTATCTGATTGATTAGACTGACTCAGATCAAACTCTATTCACCGCAGT
CTCGAACGATGCGTTAGTGAATCACCACTTTCCGCTTGCCGAGCTTATTT
GTATCTCCGCGCACACCTCTTTTGTCCCCGCCCGCGGTACTTCTCCTATT
TTCATCGCGGACGGTTGAGGGCGCCGACAGAGCGCCACCTAAGAGGTTAA
GGTTTGAGGTCGCGCTATATACTGCTTAATTAGATGCCATGTGCTTAGTT
AGGACTCGAGTATATACGCCTATGATGATAGACCGCGAGCCCACCGATAT
TCTTACATCCTCGCTTGTTTAGTCGTTATATATTATAATTAATCCCAATT
TTGCAGGAGCCTACGTTTCACCGAAGCACGCGTATGTCCTATATCACGGA
CGAACTTAATGCACCGGACCAACGAACACCCAAAGCTTATACTTCCTTGA
GCACACGCCGAGACGTATT

TTTTCTCGATGCTANTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATGGCAAAACTTCATAGTA
TACCCCTACATGAGACAGAGAACTCAGTCATCCCCAGAGCTTACTTGCTG
GACTCATTATATTGTATATCCTGCAACATAAATTGAAGAGAAATTCTGAC
TGCTTTGTTAGTTTGGCATAATAAAACCGGCATAAATTCATCAATAAGTG
AATTCTTAAAATTGTTTCTTGAATATTAGTGACTGAATTCCAGAGGGAAA
ACAAAATCGCTTTCTCAAACTTATTGTTCCCTAATAGCTTTGACTCTAAA
TGTGTTGGGTGGAATTTATCACTTGTATGATAGCCTAGCTTCTGAACTTG
GAGATGGGTTAATATTTAATGAACTAGCAAATACTTATACCAATTACAGA
ATTTAAAGGTATGACGGACTGTTGCATTGACATAGGGATGGGATGGCCAA
TATGCTTGATACTTGTATTTTCAGTTGTTACAGAATTATTTATTCATTCT
TCGAACAAAGAATTATTTAGTATTTAGAGTTTGCCAGGTACCACTCTGAA
GATCATACATACCATAAAAATAAAGAGAGCTCCTGCCTCGTCCATAATCA
TTGTTTTTTTTTAGCAACACAAATGTAACAGCAGATTTCTCNACACCATA
GCAATTAGCCATTCCTTCTCAAAA

Query= MSMg01no485_p11.g1 MSMg01no485_p11.g1 CHROMAT_FILE:
MSMg01no485_p11.g1 PHD_FILE: MSMg01no485_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:07 2005
         (531 letters)



>mm_chr3_141628162_141629092
          Length = 931

 Score =  874 bits (452), Expect = 0.0
 Identities = 526/588 (89%), Gaps = 57/588 (9%)
 Strand = Plus / Plus

                                                                       
Query: 1   taatggcaaaacttcatagtatacccctacatgagacagagaactcagtcatccccagag 60
           |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 144 taattgcaaaacttcatagtatacccctacatgaaacagagaactcagtcatccccagag 203

                                                                       
Query: 61  cttacttgctggactcattatattgtatatcctgcaacataaattgaagagaaattctga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cttacttgctggactcattatattgtatatcctgcaacataaattgaagagaaattctga 263

                                                                       
Query: 121 ctgctttgttagtttggcataataaaaccggcataaattcatcaataagtgaattcttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgctttgttagtttggcataataaaaccggcataaattcatcaataagtgaattcttaa 323

                                                                       
Query: 181 aattgtttcttgaatattagtgactgaattccagagggaaaacaaaatcgctttctcaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aattgtttcttgaatattagtgactgaattccagagggaaaacaaaatcgctttctcaaa 383

                                                                       
Query: 241 cttattgttccctaatagctttgactctaaatgtgttgggtggaatttatcacttgtatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttattgttccctaatagctttgactctaaatgtgttgggtggaatttatcacttgtatg 443

                                                                       
Query: 301 atagcctagcttctgaacttggagatgggttaatatttaatgaactagcaaatacttata 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 444 atagcctagcttctgaacttggagatgggttaatatttaatgaaccagcaaatacttata 503

                                                                       
Query: 361 ccaattacagaatttaaaggtatgacggactgttgcattgacatagggatgggatggcca 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 504 ccaattacagaatttaaaggtatgacgggctgttgcattgacatagggatgggatggcca 563

                                                                       
Query: 421 atatgcttgatacttgtattttcagttg-------------------------------- 448
           ||||||||||||||||||||||||||||                                
Sbjct: 564 atatgcttgatacttgtattttcagttgatacttgtattttcagttgatacttgtatttt 623

                                                                       
Query: 449 -------------------------ttacagaattatttattcattcttcgaacaaagaa 483
                                    ||||||||||||||||||||||||| |||||||||
Sbjct: 624 cagttgatacttgtattttcagttgttacagaattatttattcattcttccaacaaagaa 683

                                                           
Query: 484 ttatttagtatttagagtttgccaggtaccactctgaagatcatacat 531
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttatttagtatttagagtttgccaggtaccactctgaagatcatacat 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)