NNNNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCAACTGATGACTACTGAATGGCTGAGAAGCACCTGAA
AAAAATGTTCAACGTCCTTAATCATCAGGGAAATGCAAATCAAAACAACC
CTGAGATTCCACCTCACACCAGTCAGAATGGCTAGGATCAAAAATTCATG
TGATAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATT
GCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAGTCAGTCTGGAGG
TTCCTCAGAAAATTGGACATAATACTACCAAAAGATCCAGCAATACCTCT
CCTGGGCATATACCCAGAAGTTCCAACTGGTAAGAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACAC
AATGGAGTACTACTCAGCTTTTAAAAACAATGAATTTATGAAATTCTTGG
ACAAATGGATGCATCTGGAGGATATCATCCTTAGTGAGGTAACCTAATCA
GAAAAGAAGTCATTAGATATGCACTCACTGATAAGTGGATATTAGCCCAG
AAACATAGAACACCCCAGATACAATTTGCAAAACACATGAAAATCAAGAA
GAGGGAAGACCAATGGGTGGATACTTTATTCCTCCTTAGAATA

GTTCCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCAGAGCCATTTGGCCA
GCCAATTTAACCAATCAGTGACCACCATGTGTCTCATAAGTAAAGGTAGA
GGGAAAGAAAGGAAAACACCAAGCCCCAACCTCTTGCCTCTACATTCACA
TGGACATGAGTCCCTGCATATACACTTGCGTGTGCGTGTGCACACATGAA
AGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG
AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAA
AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG
AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA
AGAAAGAAAGAAAGAGAGGGGGGGAGGAAGAAAAGAAGGGAAGAGAAGAG
AAGAAAAGAGAGGAGAGGGGAGGGGAGGTNTTTNTTTTTTTGTTTGTNTG
TTTGGTAGGNTTTTTGTGATTTAGTTGTTTTATTTTTTTTGAGTTTTGTT
TGTTAGTAATATGGTAGTAGGGTATAGGGGGAGTTATTCAATTTGTGTTA
TCCATGAGTTTTTTTGTTTCCCGCCTTCCCTTTTTTATCCGCCGCCCTCT
TTTCACGCTTCCACTTCCGTCTTTTGTTTTTTACGGTTTTCCGCTCCACG
TCCCGCCTAG

Query= MSMg01no486_d03.g1 MSMg01no486_d03.g1 CHROMAT_FILE:
MSMg01no486_d03.g1 PHD_FILE: MSMg01no486_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:26 2005
         (447 letters)



>mm_chr3_145083783_145084629
          Length = 847

 Score =  410 bits (212), Expect = e-119
 Identities = 263/280 (93%), Gaps = 4/280 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccagagccatttggccagccaatttaaccaatcagtgaccaccatgtgtctcataagta 60
           ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 cccagagccgtttggccagccaatttaaccaatcagtgaccaccatgtgtctcataagca 260

                                                                       
Query: 61  aaggtagagggaaagaaaggaaaacaccaagccccaacctcttgcctctacattcacatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggtagagggaaagaaaggaaaacaccaagccccaacctcttgcctctacattcacatg 320

                                                                       
Query: 121 gacatgagtccctgcatatacacttgcgtgtgcgtgtgcacacatgaaagaaaggaagaa 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 gacatgagtccctgcatatacacttgcgtgtgcgtgtgcacacacgaaagaaaggaagaa 380

                                                                       
Query: 181 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaggaaggaaggaaggaagga- 239
           |||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||| || 
Sbjct: 381 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagag 440

                                                   
Query: 240 aggaaggaaggaaggaaggaaggaaaga-aaga-aagaaa 277
           |||  ||| ||||| || ||||| |||| |||| ||||||
Sbjct: 441 agggggga-ggaagaaaagaagggaagagaagagaagaaa 479



 Score =  190 bits (98), Expect = 2e-52
 Identities = 122/136 (89%), Gaps = 11/136 (8%)
 Strand = Plus / Plus

                                                                       
Query: 322 gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 381
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaaagaaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 425

                                                                       
Query: 382 ga----------gag-ggggggaggaagaaaagaagggaagagaagagaagaaaagagag 430
           ||          ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaaagaaagaaagagaggggggaggaagaaaagaagggaagagaagagaagaaaagagag 485

                           
Query: 431 gagaggggaggggagg 446
           |||||| |||| ||||
Sbjct: 486 gagaggagaggagagg 501


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 141
Number of extensions: 48
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 44
Number of HSP's successfully gapped: 2
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space:   365769
Effective search space used:   365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)