NNNNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTTCAGATTTCCTAGTACCACTTGCAAGTTTGATCCCCTG
TTTGGACCAACATTCCAAAGTCACTTTTTTCAATGCCAGAAGTAAACAGA
GGACCTCCATTGCCCCTTATCAGGAAAAAGCTGGGATGGTATATCATGAA
GTGTAAGCCCTACATGCCAGTGTCGATAGCAATGGCTCACTCTCACTGGA
GCTGGGTTTAACTAGAAAACAGAAACCTAAAGCATTTCTCAGAAGCCCTT
CATAGCTCGCTGAATACTGCTAACCTTTGAGCAGCTCATCTCTCTGAGGA
GCCTCCACGCTAAGCACCTAGCTGTTCCAGTTTCTAAGCAACCCCTGACT
GCCTTACGTACATGAGACCCCACAAGCTTCTTCATTTCTTTTTTTTTTGT
TTTTTGTTTTTGTTGTTGTTGTTTTGTTTTTGGTTTTTTTGGTTTTTTTG
TTTTGTTTTGTTTTTTTGTTTTTTTTAATTAGGTATTTTCCTCATTTACA
TTTTCAATGCTATCCCAAAGGTCCCCCATACCCACCTCCCCAATCCCCTA
CCCACCCACTGCCCCTTTTTGGCCCTGGCTTTCCCCTGTATTGGGGCATA
TAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAATGATGACCAACTAGG
CCATCTTTTGATACATATGCAGCTAAAGACAAGAAG

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTTTAA
TAGGATTATTGGGTTTTCTGGAATCCAACTTCTTGAGTTCTTTACATATA
TTAGATATTATTCCCCTATCAGATTTAGGATTGGTAAAGATCCTTTCCTA
ATCTATTGATGGCCTTTTTGTCTTATTGATAGTGTCTTTTGCCTTACAGA
AGCTTTGCAATTTTATGAGGTCCCATTTATCAATTCTTGATCTTTCAGCA
CAAGGAATTGGTGTTCTGTTCAAGAATTTTTCTCCTGTGCCCATAGCTTC
CAGGCCCTTCCCCACTTTCTCTTCTATAAGTTTCAGTGTCTTTGGCGTTA
TGTGGAGTTCCTTAATCCATTTAGACTTGAGCTTTGTACAAGGAGATAAG
AATGGATCAATTCACATTCTTCTACATGATAACCGCCAGTTGAACCAGCA
TCATTTGTTGAAAATGCTGTCTTTTTTTCTACTGGATGATTTTAATTCCT
TTTTCAAAGATCAAGTGGCCATAGGTGTGTGGGTAAATTTCTGAGTCTTC
AATTCTATTCCATTGATCTACCTGTCTTTTGCTGTACCAGTACCATGTAG
TTTCTGTCACAATTGCTCTGTAGTATAACTTGAGGTAAGAGATGGTGATT
CCACTAGAGGTTCTTTTATTGTTGAGAATAGTTATTGCTATACTAAGTAT
TTTGTTATTCCAGATGA

Query= MSMg01no486_f20.b1 MSMg01no486_f20.b1 CHROMAT_FILE:
MSMg01no486_f20.b1 PHD_FILE: MSMg01no486_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:39 2005
         (579 letters)



>mm_chr3_155571838_155572816
          Length = 979

 Score =  920 bits (476), Expect = 0.0
 Identities = 543/566 (95%), Gaps = 9/566 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   accacttgcaagtttgatcccctgtttggaccaacattccaaagtcacttttttcaatgc 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accacttgcaagtttgatgccctgtttggaccaacattccaaagtcacttttttcaatgc 501

                                                                       
Query: 61  cagaagtaaacagaggacctccattgccccttatcaggaaaaagctgggatggtatatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagaagtaaacagaggacctccattgccccttatcaggaaaaagctgggatggtatatca 441

                                                                       
Query: 121 tgaagtgtaagccctacatgccagtgtcgatagcaatggctcactctcactggagctggg 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 tgaagtgtaagccctacatgccagtgtcgatagcaatgactcactctcactggagctggg 381

                                                                       
Query: 181 tttaactagaaaacagaaacctaaagcatttctcagaagcccttcatagctcgctgaata 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 tttaactagaaaacagaaacctaaagcatttctcagaagccgttcatagctcgctgaata 321

                                                                       
Query: 241 ctgctaacctttgagcagctcatctctctgaggagcctccacgctaagcacctagctgtt 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgctaacctgtgagcagctcatctctctgaggagcctccacgctaagcacctagctgtt 261

                                                                       
Query: 301 ccagtttctaagcaacccctgactgccttacgtacatgagaccccacaagcttcttcatt 360
           ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 260 ccagtttctgagcagcccctgactgccttacctacatgagaccccacaagcttcttcatt 201

                                                                       
Query: 361 tcttttttttttgttttttgtttt-tgttgttgttgttttgtttttggtttttttggttt 419
            |||||||| || ||||||||||| | ||||| |||||| ||||||| |||||||| |||
Sbjct: 200 cctttttttgtt-ttttttgttttgttttgtt-ttgttt-gtttttg-tttttttgtttt 145

                                                                       
Query: 420 ttttgttttgttttgtt-tttttgttttttttaattaggtattttcctcatttacatttt 478
           |||| ||||||||| || ||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 144 tttt-ttttgtttttttgtttttgtttttt--aattaggtattttcctcatttacatttt 88

                                                                       
Query: 479 caatgctatcccaaaggtcccccatacccacctccccaatcccctacccacccactgccc 538
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 87  caatgctatcccaaaggtcccccatacccacctccccaatcccctacccacccactgcgc 28

                                     
Query: 539 ctttttggccctggctttcccctgta 564
           ||||||||||||||| ||||||||||
Sbjct: 27  ctttttggccctggcgttcccctgta 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)