NNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCC
GCGGAATTCCCTTCACTTTTATCAAAGTATTAAAATATTTTAGAGTAAAG
CTTGTTATACTTCAATAAATAATGCAAAAATATCTCCACACTCGGGTTCT
TAGGGAAAAAAATTCAAGCATAAGCTTCCACTTGCAAGTCCTTCTGAGGT
AGCCATATGAAATATTTACTAGAGATCAGAGGGAGAAACTCCTTCTAAGT
CAAAAAATTTTACTTGCAATTTGAACTTTCCAAATACGATAAAACCATAC
ACACATTCATTTTGCCAAAATTGAGGCTTCAAGTCTAAGCCATACCCTGA
CACGCTCTATGTGCTTGGTAGCAGGGCATAGAACTGATGAGAGAACTTTA
TCAGTGGGAACTGAGAAGACACTGGGGATGGACAGACAAAGAGAGAGAAG
TGACTTGAATGTTTTTGAGTGGATTCTGAACGAGGGCTTTACAGTAATGT
GTAAACATTACAAACGGGTTAAGAGAGCAAGAGGAAAAACGGCCAATTTA
AAAATACTTCCCGCTGCTTTCTATGCTTAATTCTTTCTCTGCCTAAAAGT
GGCATGTCACTTCTCTTCCTGGAAGGACTGGGACCTCTCCTGAGACCAGA
GTAAAGCAAGTGAGGAAATTCACCAAGCCAACTCCAGGAGGCTGTCCTGT
TGCTTCCGAATGTGCCGCACGCATGCATGCACGCACACACGCAN

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGAGGCACATGAGACTCAGATATGTAATTT
TACTGGCATAATAAACCATAGCATTAGGTGGAGATGAGTCACATTTTAGA
AACATTGAGTATAGATTAAGAGACTGCCATATCTGGGGATCCATCTCATA
ATCAGCTTCCAAACACTGACACCATTGCATACACTAGCAAGATTTTGCTG
AAAGGACCCAGATATAGCTGTCTCTTGTGAGACAATGCCGGGGCCTAGCA
AACACAGACGTGGATGCTCATAGTCAGCTATTGGATGGATCACAGGCCCC
CCAATGGAGGAGCTAGAGAAAGTAACCAAGGAGCTAAAGGGATCTGCAAC
CCTATAGGTGGAACAACAATATGAACTACCCAGTGCCCCCCCAGAGCTCG
TGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCATCAGTGG
AAAGAGAGGCTCATTGGTCATGCAAACTTTATCTGCCTCAGTACAGGGGA
ACGCCAGGTCCAAGAAGTTGGAGTGGATGGGTGGGGGAGTCGGTTGGGGA
GCATATGGGGGACTTTTGGCATACCATTGCCGTTGCTATTGACATTTATC
CTTTACTCCATTTTATTTTTTTGCCCCTGTTCCTTTTTTTTCTCCCTCGT
CTTTTGTTTTTCCCCCTTTCGTTTTTTATTTTCCCTTTTTCCTTCCCTTT
TCCTCCCTT

Query= MSMg01no486_j21.b1 MSMg01no486_j21.b1 CHROMAT_FILE:
MSMg01no486_j21.b1 PHD_FILE: MSMg01no486_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:58 2005
         (697 letters)



>mm_chr3_147309775_147310871
          Length = 1097

 Score = 1309 bits (677), Expect = 0.0
 Identities = 686/689 (99%)
 Strand = Plus / Minus

                                                                       
Query: 8   aattcccttcacttttatcaaagtattaaaatattttagagtaaagcttgttatacttca 67
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aattcccttcacttatatcaaagtattaaaatattttagagtaaagcttgttatacttca 809

                                                                       
Query: 68  ataaataatgcaaaaatatctccacactcgggttcttagggaaaaaaattcaagcataag 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ataaataatgcaaaaatatctccacactcgggttcttagggaaaaaaattcaagcataag 749

                                                                       
Query: 128 cttccacttgcaagtccttctgaggtagccatatgaaatatttactagagatcagaggga 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 cttccacttgcaagtccttctgaggtagccatatgaaatatttactagagatcagaggga 689

                                                                       
Query: 188 gaaactccttctaagtcaaaaaattttacttgcaatttgaactttccaaatacgataaaa 247
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gaaactccttctaagtcaaaatattttacttgcaatttgaactttccaaatacgataaaa 629

                                                                       
Query: 248 ccatacacacattcattttgccaaaattgaggcttcaagtctaagccataccctgacacg 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ccatacacacattcattttgccaaaattgaggcttcaagtctaagccataccctgacacg 569

                                                                       
Query: 308 ctctatgtgcttggtagcagggcatagaactgatgagagaactttatcagtgggaactga 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctctatgtgcttggtagcagggcatagaactgatgagagaactttatcagtgggaactga 509

                                                                       
Query: 368 gaagacactggggatggacagacaaagagagagaagtgacttgaatgtttttgagtggat 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaagacactggggatggacagacaaagagagagaagtgacttgaatgtttttgagtggat 449

                                                                       
Query: 428 tctgaacgagggctttacagtaatgtgtaaacattacaaacgggttaagagagcaagagg 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tctgaacgagggctttacagtaatgtgtaaacattacaaacgggttaagagagcaagagg 389

                                                                       
Query: 488 aaaaacggccaatttaaaaatacttcccgctgctttctatgcttaattctttctctgcct 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaaaacggccaatttaaaaatacttcccgctgctttctatgcttaattctttctctgcct 329

                                                                       
Query: 548 aaaagtggcatgtcacttctcttcctggaaggactgggacctctcctgagaccagagtaa 607
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 328 aaaagtggcatgtcacttctcttcctggaaggactgagacctctcctgagaccagagtaa 269

                                                                       
Query: 608 agcaagtgaggaaattcaccaagccaactccaggaggctgtcctgttgcttccgaatgtg 667
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agcaagtgaggaaattcaccaagccaactccaggaggctgtcctgttgcttccgaatgtg 209

                                        
Query: 668 ccgcacgcatgcatgcacgcacacacgca 696
           |||||||||||||||||||||||||||||
Sbjct: 208 ccgcacgcatgcatgcacgcacacacgca 180


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space:   746769
Effective search space used:   746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)